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GeneE
19 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
AP1G1
adaptor related protein complex 1 subunit gamma 1
Chromosome 16 Β· 16q22.2
NCBI Gene: 164Ensembl: ENSG00000166747.14HGNC: HGNC:555UniProt: A0A140VJE7
169PubMed Papers
22Diseases
0Drugs
24Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTransporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
Golgi to lysosome transportsmall GTPase bindingprotein bindingkinesin bindingUsmani-Riazuddin syndrome, autosomal dominantUsmani-Riazuddin syndrome, autosomal recessiveHIV infectiongenetic disorder
✦AI Summary

AP1G1 encodes the gamma-1 subunit of adaptor protein complex 1 (AP-1), a heterotetrameric clathrin-associated complex essential for intracellular vesicular trafficking and protein sorting at the trans-Golgi network and endosomes 1. The AP1Ξ³1 subunit is critical for clathrin-coated vesicle formation and recognition of sorting signals in transmembrane cargo molecules 1. Functionally, AP1G1 mediates endosome recycling pathways and regulates polarized localization of somatodendritic proteins in neurons 1. The protein forms molecular complexes with other membrane receptors, such as ASCT2-EGFR, facilitating receptor-mediated endocytosis 2. AP1G1 also serves as a host dependency factor for coronavirus replication, likely regulating TMPRSS2 activity at the plasma membrane 3. Pathogenic variants in AP1G1 cause Usmani-Riazuddin syndrome, a neurodevelopmental disorder characterized by intellectual disability, developmental delay, and epilepsy 14. Both de novo heterozygous and bi-allelic variants have been identified as disease-causing 1. Animal studies demonstrate that complete AP1G1 loss is embryonic lethal, while hypomorphic mutations cause abnormalities in polarized epithelial cells of sensory organs 56. The gene's critical role in development and neuronal function makes it clinically significant for understanding adaptinopathies and neurodevelopmental disorders.

Sources cited
1
AP1G1 encodes gamma-1 subunit of AP-1 complex essential for vesicular trafficking and causes neurodevelopmental disorder
PMID: 34102099
2
AP1G1 forms molecular complexes with ASCT2-EGFR and mediates receptor-mediated endocytosis
PMID: 28823958
3
AP1G1 serves as host dependency factor for coronavirus replication and regulates TMPRSS2 activity
PMID: 35879413
4
AP1G1 variants cause Usmani-Riazuddin syndrome with distinctive facial features
PMID: 38665048
5
Hypomorphic AP1G1 mutations cause abnormalities in polarized epithelial cells of sensory organs
PMID: 27090238
6
AP1G1 knockout is embryonic lethal and affects cadherin-mediated cell adhesion
PMID: 37108275
Disease Associationsβ“˜22
Usmani-Riazuddin syndrome, autosomal dominantOpen Targets
0.70Strong
Usmani-Riazuddin syndrome, autosomal recessiveOpen Targets
0.63Moderate
HIV infectionOpen Targets
0.50Moderate
genetic disorderOpen Targets
0.47Moderate
epilepsyOpen Targets
0.47Moderate
Intellectual disabilityOpen Targets
0.46Moderate
complex neurodevelopmental disorderOpen Targets
0.46Moderate
neurodegenerative diseaseOpen Targets
0.32Weak
Neurodevelopmental disorderOpen Targets
0.27Weak
Myasthenia gravisOpen Targets
0.16Weak
ureterolithiasisOpen Targets
0.10Suggestive
DNA methylationOpen Targets
0.08Suggestive
cystOpen Targets
0.07Suggestive
autismOpen Targets
0.06Suggestive
atrial fibrillationOpen Targets
0.06Suggestive
Neck painOpen Targets
0.05Suggestive
retinitis pigmentosaOpen Targets
0.05Suggestive
intellectual disability, autosomal dominant 50Open Targets
0.05Suggestive
Familial exudative vitreoretinopathyOpen Targets
0.05Suggestive
autism spectrum disorderOpen Targets
0.05Suggestive
Usmani-Riazuddin syndrome, autosomal dominantUniProt
Usmani-Riazuddin syndrome, autosomal recessiveUniProt
Pathogenic Variants24
NM_001128.6(AP1G1):c.1246C>T (p.Arg416Ter)Pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜…β˜†β˜†2024β†’ Residue 416
NM_001128.6(AP1G1):c.43C>T (p.Arg15Trp)Likely pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜…β˜†β˜†2022β†’ Residue 15
NM_001128.6(AP1G1):c.1678C>T (p.Gln560Ter)Likely pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜†β˜†β˜†2025β†’ Residue 560
NM_001128.6(AP1G1):c.1872+1G>TPathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜†β˜†β˜†2025
NM_001128.6(AP1G1):c.610C>T (p.Arg204Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 204
NM_001128.6(AP1G1):c.126C>A (p.Asp42Glu)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 42
NM_001128.6(AP1G1):c.1295_1299del (p.Tyr432fs)Pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜†β˜†β˜†2025β†’ Residue 432
NM_001128.6(AP1G1):c.77_84del (p.Met26fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 26
NM_001128.6(AP1G1):c.515dup (p.Met172fs)Pathogenic
Usmani-Riazuddin syndrome, autosomal recessive
β˜…β˜†β˜†β˜†2024β†’ Residue 172
NM_001128.6(AP1G1):c.1135C>T (p.Arg379Ter)Pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2024β†’ Residue 379
NM_001128.6(AP1G1):c.436dup (p.Leu146fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 146
NM_001128.6(AP1G1):c.919-1G>TLikely pathogenic
See cases
β˜…β˜†β˜†β˜†2024
NM_001128.6(AP1G1):c.-2G>ALikely pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜†β˜†β˜†2024
NM_001128.6(AP1G1):c.2039del (p.Gln680fs)Likely pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜†β˜†β˜†2024β†’ Residue 680
NM_001128.6(AP1G1):c.868del (p.Tyr290fs)Likely pathogenic
Usmani-Riazuddin syndrome, autosomal dominant;Usmani-Riazuddin syndrome, autosomal recessive
β˜…β˜†β˜†β˜†2024β†’ Residue 290
NM_001128.6(AP1G1):c.1497+1G>APathogenic
Usmani-Riazuddin syndrome, autosomal recessive|Usmani-Riazuddin syndrome, autosomal dominant
β˜…β˜†β˜†β˜†2023
NM_001128.6(AP1G1):c.2080C>T (p.Gln694Ter)Pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2022β†’ Residue 694
NM_001128.6(AP1G1):c.1735_1749delinsCCC (p.Ala579_Arg583delinsPro)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 579
NM_001128.6(AP1G1):c.974+1G>TLikely pathogenic
Neurodevelopmental disorder
β˜…β˜†β˜†β˜†2021
NM_001128.6(AP1G1):c.1630del (p.Ile544fs)Pathogenic
Usmani-Riazuddin syndrome, autosomal dominant
β˜†β˜†β˜†β˜†2025β†’ Residue 544
View on ClinVar β†—
Related Genes
AP4B1Protein interaction100%AP4M1Protein interaction100%BBS1Protein interaction100%BBS5Protein interaction100%BBIP1Protein interaction100%BBS4Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
53%
Brain
49%
Lung
47%
Heart
32%
Ovary
31%
Gene Interaction Network
Click a node to explore
AP1G1AP4B1AP4M1BBS1BBS5BBIP1BBS4
PROTEIN STRUCTURE
Preparing viewer…
PDB1IU1 Β· 1.80 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.11Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.05 [0.02–0.11]
RankingsWhere AP1G1 stands among ~20K protein-coding genes
  • #2,613of 20,598
    Most Researched169 Β· top quartile
  • #2,003of 5,498
    Most Pathogenic Variants24
  • #91of 17,882
    Most Constrained (LOEUF)0.11 Β· top 1%
Genes detectedAP1G1
Sources retrieved19 papers
Response timeβ€”
πŸ“„ Sources
19β–Ό
1
De novo and bi-allelic variants in AP1G1 cause neurodevelopmental disorder with developmental delay, intellectual disability, and epilepsy.
PMID: 34102099
Am J Hum Genet Β· 2021
1.00
2
Bidirectional genome-wide CRISPR screens reveal host factors regulating SARS-CoV-2, MERS-CoV and seasonal HCoVs.
PMID: 35879413
Nat Genet Β· 2022
0.90
3
A hypomorphic mutation of the gamma-1 adaptin gene (Ap1g1) causes inner ear, retina, thyroid, and testes abnormalities in mice.
PMID: 27090238
Mamm Genome Β· 2016
0.80
4
Usmani-Riazuddin syndrome can have a recognizable phenotype: Report of a novel AP1G1 variant.
PMID: 38665048
Clin Genet Β· 2024
0.70
5
Usmani-Riazuddin Syndrome: Functional Characterization of a Novel c.196G>A Variant in the
PMID: 41226632
Int J Mol Sci Β· 2025
0.60