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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ATF7IP
activating transcription factor 7 interacting protein
Chromosome 12 · 12p13.1
NCBI Gene: 55729Ensembl: ENSG00000171681.14HGNC: HGNC:20092UniProt: B3KNI7
71PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
transcription coregulator activitynegative regulation of DNA-templated transcriptionpositive regulation of DNA-templated transcriptionnucleusschizophreniabreast carcinomaprostate carcinomaintelligence
✦AI Summary

ATF7IP functions as a chr12 regulator that couples transcriptional factors to histone-modifying complexes, playing crucial roles in both transcriptional repression and cellular differentiation. The protein forms a hetero-trimeric complex with SETDB1 methyltransferase, where one ATF7IP copy interacts with Setdb1 through coiled-coil domains, blocking nuclear export by competing with Crm1 for Setdb1's nuclear export signals 1. This ATF7IP-SETDB1 partnership mediates H3K9me3 deposition for heterochromatin formation and gene silencing, particularly important for retrotransposon suppression 2. In hematopoietic development, ATF7IP regulates stem cell maintenance and T lymphopoiesis by controlling key regulatory genes like bach2b, ccr9a, and irf4a through H3K9me3 modifications 23. The complex prevents excessive myeloid differentiation while maintaining hematopoietic stem cell expansion capacity 2. ATF7IP also demonstrates context-dependent functions in cancer biology, acting as a ferroptosis inhibitor in hepatocellular carcinoma by epigenetically silencing CYB5R2 transcription and stabilizing PARK7 protein, contributing to Sorafenib resistance 4. Additionally, ATF7IP depletion in monocytic acute myeloid leukemia enhances NK cell-mediated immunosurveillance through upregulation of interferon-stimulated genes 5. The protein has emerged as a diagnostic biomarker for Alzheimer's disease and various cancers 67.

Sources cited
1
ATF7IP forms hetero-trimeric complexes with SETDB1 and blocks nuclear export by competing with Crm1
PMID: 40339988
2
ATF7IP regulates hematopoietic stem cell maintenance and prevents excessive myeloid differentiation through SETDB1-mediated H3K9me3
PMID: 36577070
3
ATF7IP controls T lymphopoiesis by regulating bach2b, ccr9a, and irf4a through H3K9me3 modifications
PMID: 40670340
4
ATF7IP inhibits ferroptosis in hepatocellular carcinoma by silencing CYB5R2 and stabilizing PARK7
PMID: 40716153
5
ATF7IP depletion enhances NK cell immunosurveillance in monocytic AML through interferon-stimulated gene upregulation
PMID: 39096901
6
ATF7IP serves as a diagnostic biomarker for Alzheimer's disease
PMID: 38230733
7
ATF7IP regulatory variants are associated with cancer risk and gene expression regulation
PMID: 29061142
Disease Associationsⓘ20
schizophreniaOpen Targets
0.42Moderate
breast carcinomaOpen Targets
0.42Moderate
prostate carcinomaOpen Targets
0.40Moderate
intelligenceOpen Targets
0.39Weak
mathematical abilityOpen Targets
0.39Weak
alcohol drinkingOpen Targets
0.38Weak
neurodegenerative diseaseOpen Targets
0.37Weak
heart failureOpen Targets
0.30Weak
luminal A breast carcinomaOpen Targets
0.30Weak
gastric cancerOpen Targets
0.30Weak
estrogen-receptor positive breast cancerOpen Targets
0.29Weak
coronary artery diseaseOpen Targets
0.28Weak
Alzheimer diseaseOpen Targets
0.28Weak
endometrial cancerOpen Targets
0.28Weak
adolescent idiopathic scoliosisOpen Targets
0.28Weak
testicular carcinomaOpen Targets
0.26Weak
prostate cancerOpen Targets
0.22Weak
Testicular Germ Cell TumorOpen Targets
0.21Weak
breast cancerOpen Targets
0.21Weak
lung adenocarcinomaOpen Targets
0.20Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
Preparing viewer…
PDB2RPQ · NMR
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.29Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.20 [0.14–0.29]
RankingsWhere ATF7IP stands among ~20K protein-coding genes
  • #6,612of 20,598
    Most Researched71
  • #1,093of 17,882
    Most Constrained (LOEUF)0.29 · top 10%
Genes detectedATF7IP
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Atf7ip and Setdb1 interaction orchestrates the hematopoietic stem and progenitor cell state with diverse lineage differentiation.
PMID: 36577070
Proc Natl Acad Sci U S A · 2023
1.00
2
Systematic identification of regulatory variants associated with cancer risk.
PMID: 29061142
Genome Biol · 2017
0.90
3
The cancer driver genes IDH1/2, JARID1C/ KDM5C, and UTX/ KDM6A: crosstalk between histone demethylation and hypoxic reprogramming in cancer metabolism.
PMID: 31221981
Exp Mol Med · 2019
0.80
4
Setdb1 and Atf7IP form a hetero-trimeric complex that blocks Setdb1 nuclear export.
PMID: 40339988
J Biol Chem · 2025
0.70
5
SETDB1 suppresses NK cell-mediated immunosurveillance in acute myeloid leukemia with granulo-monocytic differentiation.
PMID: 39096901
Cell Rep · 2024
0.60