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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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BEX1
brain expressed X-linked 1
Chromosome X · Xq22.1|Xq22
NCBI Gene: 55859Ensembl: ENSG00000133169.7HGNC: HGNC:1036UniProt: Q9HBH7
35PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
transcription coactivator bindingpositive regulation of transcription by RNA polymerase IIprotein bindingsignaling adaptor activityhepatocellular carcinomagliomaglioblastoma multiformeneoplasm
✦AI Summary

BEX1 (brain expressed X-linked 1) is a signaling adapter molecule with context-dependent roles in cell proliferation, differentiation, and disease. Normally expressed in brain, pancreas, testis, and ovary 1, BEX1 functions in p75NTR/NGFR signaling and coordinates cell cycle progression with neuronal differentiation [UniProt]. However, dysregulation of BEX1 drives multiple cancer pathways. In hepatoblastoma and cancer stem cell-enriched hepatocellular carcinoma, DNMT1-mediated methylation silences BEX1; its reactivation promotes stemness by blocking RUNX3-mediated inhibition of Wnt/β-catenin signaling 2. BEX1 further sustains hepatoblastoma stemness through PPARγ/PDK1-dependent enhancement of the Warburg effect 3. In gliomas, BEX1 suppression via promoter methylation paradoxically activates pro-tumorigenic AKT/ERK/STAT3 signaling 4, while in glioblastoma survivors post-radiotherapy, BEX1 upregulation promotes actin polymerization and YAP/TAZ activation, enhancing radioresistance 5. Conversely, BEX1 displays cardioprotective antiviral functions during coxsackievirus infection by limiting viral replication and regulating interferon-beta expression 6, though it also amplifies pathological proinflammatory gene expression during heart failure by stabilizing AU-rich element-containing mRNAs 7. These findings establish BEX1 as a pleiotropic regulator with therapeutic implications across cancer and cardiovascular disease.

Sources cited
1
BEX1 required for cancer stem cell self-renewal in hepatoblastoma and CSC-HCC through interaction with RUNX3 and Wnt/β-catenin activation; DNMT1-mediated promoter methylation regulates BEX1 expression
PMID: 34217777
2
BEX1 enhances Warburg effect in hepatoblastoma cells through PPARγ/PDK1-dependent pathway to promote stemness maintenance
PMID: 37715024
3
BEX1 localized to chromosome Xq22; 1.0 kb transcript highly expressed in brain, pancreas, testis, and ovary
PMID: 11989783
4
BEX1 significantly downregulated in gliomas due to promoter methylation; this suppression activates AKT/ERK/STAT3 signaling and alters cell cycle and apoptosis
PMID: 40804095
5
BEX1 plays cardioprotective role during CVB3 infection by limiting viral replication and regulating interferon-beta expression
PMID: 35192678
6
BEX1 is heart failure-induced gene functioning as mRNA-associated protein that enhances stability and expression of proinflammatory AU-rich element-containing mRNAs
PMID: 29192139
7
BEX1 and BEX4 upregulated in GBM cells surviving radiotherapy; promote actin polymerization and YAP/TAZ signaling activation enhancing radioresistance
PMID: 34576008
Disease Associationsⓘ20
hepatocellular carcinomaOpen Targets
0.09Suggestive
gliomaOpen Targets
0.09Suggestive
glioblastoma multiformeOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.08Suggestive
acute myeloid leukemiaOpen Targets
0.08Suggestive
Familial exudative vitreoretinopathyOpen Targets
0.06Suggestive
retinitis pigmentosaOpen Targets
0.05Suggestive
early-onset non-syndromic cataractOpen Targets
0.05Suggestive
infectionOpen Targets
0.04Suggestive
snowflake vitreoretinal degenerationOpen Targets
0.04Suggestive
Familial drusenOpen Targets
0.04Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.04Suggestive
Coats diseaseOpen Targets
0.04Suggestive
exfoliation syndromeOpen Targets
0.04Suggestive
Rare isolated myopiaOpen Targets
0.04Suggestive
osteoarthritisOpen Targets
0.04Suggestive
retinitis pigmentosa 84Open Targets
0.04Suggestive
birdshot chorioretinopathyOpen Targets
0.04Suggestive
lung carcinomaOpen Targets
0.04Suggestive
retinitis pigmentosa and erythrocytic microcytosisOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CALML5Protein interaction96%CALML3Protein interaction96%CALML4Protein interaction96%LMO2Protein interaction90%NHLH2Protein interaction90%LDB1Protein interaction90%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
75%
Ovary
7%
Heart
3%
Liver
1%
Lung
1%
Gene Interaction Network
Click a node to explore
BEX1CALML5CALML3CALML4LMO2NHLH2LDB1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9HBH7
View on AlphaFold ↗
RankingsWhere BEX1 stands among ~20K protein-coding genes
  • #10,919of 20,598
    Most Researched35
Genes detectedBEX1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
DNMT1-mediated methylation of BEX1 regulates stemness and tumorigenicity in liver cancer.
PMID: 34217777
J Hepatol · 2021
1.00
2
BEX1 supports the stemness of hepatoblastoma by facilitating Warburg effect in a PPARγ/PDK1 dependent manner.
PMID: 37715024
Br J Cancer · 2023
0.90
3
Cloning and expression pattern of a spermatogenesis-related gene, BEX1, mapped to chromosome Xq22.
PMID: 11989783
Biochem Genet · 2002
0.80
4
Methylation-induced suppression of BEX1 activates AKT/ERK/STAT3 signaling pathways regulating cell cycle and apoptosis in glioma.
PMID: 40804095
Sci Rep · 2025
0.70
5
BEX1 is a critical determinant of viral myocarditis.
PMID: 35192678
PLoS Pathog · 2022
0.60