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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CCL3L1
C-C motif chemokine ligand 3 like 1
Chromosome 17 · 17q21.1
NCBI Gene: 6349Ensembl: ENSG00000276085.1HGNC: HGNC:10628UniProt: P16619
71PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingchemokine activityCCR chemokine receptor bindinginflammatory response
✦AI Summary

CCL3L1 is a CC chemokine ligand that functions as a potent ligand for HIV co-receptor CCR5 and receptors CCR1 and CCR3 1. It exhibits chemotactic activity for lymphocytes and monocytes, with the processed form LD78-beta showing 20-30 fold higher chemotactic activity and potent HIV-1 inhibition [UniProt]. CCL3L1 operates within the chemokine-mediated signaling pathway, promoting cell migration and inflammatory responses [GO Annotations]. Mechanism: CCL3L1 functions through competitive binding to CCR5, blocking HIV-1 entry 1. The gene exhibits complex copy number variation (0-11 copies in European populations), localized to a segmental duplication hotspot on chromosome 17.2 1. Increased CCL3L1 expression enhances glioblastoma cell proliferation through CCR3 and CCR5 signaling 2. Disease Relevance: Lower CCL3L1 copy number associates with increased HIV-1 acquisition risk and faster AIDS progression 1. Copy number variation influences systemic lupus erythematosus (SLE) susceptibility and lupus nephritis severity 3. CCL3L1 expression is significantly upregulated in COPD monocyte/macrophages 4. However, CCL3L1 copy number shows no association with lung function variation 5 and limited utility for HIV-associated neurocognitive disorder prediction 6. Clinical Significance: CCL3L1 represents a promising pharmacological target; CCR5 antagonists like maraviroc show HIV suppression potential, though respiratory disease applications show limited promise 5.

Sources cited
1
CCL3L1 is a natural HIV-1 co-receptor ligand with potent HIV-suppressive properties; lower copy number associates with enhanced HIV acquisition and AIDS progression risk
PMID: 19287150
2
CCL3L1 is significantly upregulated in monocytes/macrophages of COPD patients compared to healthy controls
PMID: 39810158
3
CCL3L1 copy number shows no association with lung function variation; CCR5 antagonist repositioning for respiratory disease is unlikely successful
PMID: 29682616
4
CCL3L1 upregulation with CCR3 and CCR5 in glioblastoma promotes tumor cell proliferation
PMID: 15662971
5
Deviation from average CCL3L1 copy number increases SLE risk and influences lupus nephritis development with CCR5 polymorphisms
PMID: 17971457
6
CCL3L1 copy number alone may not effectively distinguish individuals at risk for HIV-associated neurocognitive disorder
PMID: 23814703
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CCL4L2Protein interaction100%CCL5Protein interaction100%CXCL8Protein interaction100%CCR2Protein interaction100%CXCR3Protein interaction100%CXCR4Protein interaction100%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
CCL3L1CCL4L2CCL5CXCL8CCR2CXCR3CXCR4
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt P16619
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.58LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.86 [0.49–1.58]
RankingsWhere CCL3L1 stands among ~20K protein-coding genes
  • #6,617of 20,598
    Most Researched71
  • #15,558of 17,882
    Most Constrained (LOEUF)1.58
Genes detectedCCL3L1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
HIV-1/AIDS susceptibility and copy number variation in CCL3L1, a gene encoding a natural ligand for HIV-1 co-receptor CCR5.
PMID: 19287150
Cytogenet Genome Res · 2008
1.00
2
Single cell transcriptomics in blood of patients with chronic obstructive pulmonary disease.
PMID: 39810158
BMC Pulm Med · 2025
0.90
3
Human
PMID: 29682616
Wellcome Open Res · 2018
0.80
4
Human gene copy number variation and infectious disease.
PMID: 25110110
Hum Genet · 2014
0.70
5
CCL3L1 and CCL4L1: variable gene copy number in adolescents with and without human immunodeficiency virus type 1 (HIV-1) infection.
PMID: 17330138
Genes Immun · 2007
0.60