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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CD6
CD6 molecule
Chromosome 11 · 11q12.2
NCBI Gene: 923Ensembl: ENSG00000013725.15HGNC: HGNC:1691UniProt: P30203
72PubMed Papers
20Diseases
2Drugs
0Pathogenic Variants
CLINICAL
Clinical Trials
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of cytokine production involved in inflammatory responseimmunological synapseplasma membraneprotein bindinginflammatory bowel diseasetype 1 diabetes mellituspsoriasisulcerative colitis
✦AI Summary

CD6 is a cell surface adhesion molecule expressed on T cells, NK cells, and thymocytes that mediates multiple immune functions 1. Functionally, CD6 acts as a costimulatory molecule that promotes T-cell activation and proliferation through interactions with its ligands CD166/ALCAM and CD318/CDCP1, while contributing to immunological synapse formation 1. Beyond adaptive immunity, CD6 functions as a calcium-dependent pattern receptor that binds both Gram-positive and Gram-negative bacterial components—lipopolysaccharide (LPS) and lipoteichoic acid—triggering MAP kinase signaling cascades and pro-inflammatory cytokine secretion [UniProt function]. Clinically, CD6 represents a significant therapeutic target due to its involvement in multiple diseases. Genome-wide association studies and Mendelian randomization analyses establish CD6 as a genetic risk factor for inflammatory bowel disease, multiple sclerosis, rheumatoid arthritis, and stroke 234. Additionally, CD6-ALCAM signaling participates in age-related muscle and bone degeneration 5. The therapeutic potential of CD6 targeting extends to cancer immunotherapy, where blocking CD6-ligand interactions enhances cytotoxic T-cell responses 67. CD6-depleted cell preparations have shown promise in hematopoietic stem-cell transplantation for reducing graft-versus-host disease 8. These diverse functions position CD6 as a multifaceted therapeutic target across autoimmune, inflammatory, oncologic, and transplantation contexts.

Sources cited
1
CD6 expression pattern, functional epitopes, multiple ligands, and roles in lymphocyte activation and adhesion
PMID: 39996744
2
CD6 as causal protein linked to inflammatory bowel disease and its subtypes through Mendelian randomization and colocalization analysis
PMID: 40118817
3
CD6 genetic associations with multiple sclerosis and rheumatoid arthritis, including rs17824933 SNP and CD6-CD166 mechanisms
PMID: 26844569
4
CD6 genetically associated with stroke risk through Mendelian randomization framework
PMID: 36253349
5
CD6-CDCP1 interaction and JAK/STAT pathway modulation in cancer immunotherapy
PMID: 39455095
6
CD6 ligands (CD166, CD318, CD44) and roles in cancer biology and immunotherapy
PMID: 39840036
7
CD6-ALCAM signaling in Th17 cells contributing to age-related muscle and bone degeneration
PMID: 38088531
8
CD6-depleted mobilized donor blood cells in HLA-haploidentical stem-cell transplantation
PMID: 12819487
Disease Associationsⓘ20
inflammatory bowel diseaseOpen Targets
0.48Moderate
type 1 diabetes mellitusOpen Targets
0.38Weak
psoriasisOpen Targets
0.37Weak
ulcerative colitisOpen Targets
0.37Weak
ankylosing spondylitisOpen Targets
0.36Weak
sclerosing cholangitisOpen Targets
0.36Weak
Crohn's diseaseOpen Targets
0.36Weak
hypothyroidismOpen Targets
0.35Weak
multiple sclerosisOpen Targets
0.28Weak
COVID-19Open Targets
0.28Weak
hypertrophic cardiomyopathyOpen Targets
0.28Weak
allergic rhinitisOpen Targets
0.24Weak
thyroid diseaseOpen Targets
0.21Weak
Eczematoid dermatitisOpen Targets
0.19Weak
respiratory system diseaseOpen Targets
0.19Weak
Abnormal thrombosisOpen Targets
0.17Weak
allergic diseaseOpen Targets
0.17Weak
deep vein thrombosisOpen Targets
0.17Weak
neoplasmOpen Targets
0.09Suggestive
cancerOpen Targets
0.09Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets2
ITOLIZUMABPhase III
T-cell differentiation antigen CD6 inhibitor
type 1 diabetes mellitus
ONCOLYSIN CD6Phase I
T-cell differentiation antigen CD6 binding agent
arthritis
Related Genes
ALCAMProtein interaction100%LCKProtein interaction100%CD8AProtein interaction100%CD247Protein interaction99%CD28Protein interaction97%SH2D1AProtein interaction91%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
12%
Liver
3%
Heart
1%
Ovary
1%
Brain
1%
Gene Interaction Network
Click a node to explore
CD6ALCAMLCKCD8ACD247CD28SH2D1A
PROTEIN STRUCTURE
Preparing viewer…
PDB5A2E · 3.15 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.03LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.82 [0.65–1.03]
RankingsWhere CD6 stands among ~20K protein-coding genes
  • #6,533of 20,598
    Most Researched72
  • #10,190of 17,882
    Most Constrained (LOEUF)1.03
Genes detectedCD6
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Associations of 2923 plasma proteins with incident inflammatory bowel disease in a prospective cohort study and genetic analysis.
PMID: 40118817
Nat Commun · 2025
1.00
2
CD6 in Human Disease.
PMID: 39996744
Cells · 2025
0.90
3
Systematic Mendelian randomization using the human plasma proteome to discover potential therapeutic targets for stroke.
PMID: 36253349
Nat Commun · 2022
0.80
4
Targeting CDCP1 boost CD8+ T cells-mediated cytotoxicity in cervical cancer via the JAK/STAT signaling pathway.
PMID: 39455095
J Immunother Cancer · 2024
0.70
5
The Link Between CD6 and Autoimmunity: Genetic and Cellular Associations.
PMID: 26844569
Curr Drug Targets · 2016
0.60