HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CDC42BPA
CDC42 binding protein kinase alpha
Chromosome 1 · 1q42.13
NCBI Gene: 8476Ensembl: ENSG00000143776HGNC: HGNC:1737UniProt: A0A0A0MRJ0
107PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Kinase
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
magnesium ion bindingprotein serine/threonine kinase activityprotein bindingATP bindingneurodegenerative diseasehair colorsmoking initiationAbnormality of the skeletal system
✦AI Summary

CDC42BPA (CDC42 binding protein kinase alpha) is a serine/threonine kinase serving as a critical downstream effector of the small GTPase CDC42 1. Its primary function involves regulating cytoskeletal reorganization and cell migration through phosphorylation of key substrates including PPP1R12C, MYL9, LIMK1, and LIMK2, thereby controlling actin dynamics at the lamellipodium and cell leading edge 2. CDC42BPA coordinates with MYO18A and LURAP1 to modulate actomyosin retrograde flow essential for cell protrusion 2. Disease relevance spans multiple pathologies. In colon cancer, CDC42BPA expression correlates directly with invasive capacity and metastatic potential; elevated expression promotes epithelial-mesenchymal transition and predicts poor patient survival 1. In colorectal cancer, miR-29a-3p suppresses CDC42BPA expression to inhibit cell migration and invasion 3. CDC42BPA expression is dysregulated in schizophrenia, with 33% elevation in dorsolateral prefrontal cortex, though functional correlation with dendritic pathology remains unclear 4. Genetic variants in CDC42BPA (rs3000811) associate with non-obstructive azoospermia and germ cell maturation arrest in male infertility 5. CDC42BPA also emerges as a metabolism-related gene with predictive power in idiopathic pulmonary arterial hypertension 6. Clinically, CDC42BPA represents a potential therapeutic target for metastatic cancers and a prognostic biomarker for patient stratification in colon cancer.

Sources cited
1
CDC42BPA-Cdc42 signaling drives colon cancer invasion and metastasis; elevated expression predicts poor survival
PMID: 29072916
2
CDC42BPA gene is transcriptionally regulated via ATF4 pathway under ER stress conditions
PMID: 37453419
3
miR-29a-3p suppresses CDC42BPA expression to inhibit colorectal cancer cell migration and invasion
PMID: 29039592
4
CDC42BPA protein expression is elevated 33% in schizophrenia dorsolateral prefrontal cortex
PMID: 29759351
5
CDC42BPA-rs3000811 variant associates with germ cell maturation arrest in non-obstructive azoospermia
PMID: 33784440
6
CDC42BPA is identified as a metabolism-related gene with strong predictive power in pulmonary arterial hypertension
PMID: 39455660
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.52Moderate
hair colorOpen Targets
0.40Moderate
smoking initiationOpen Targets
0.37Weak
Abnormality of the skeletal systemOpen Targets
0.37Weak
open-angle glaucomaOpen Targets
0.35Weak
autosomal recessive ataxia due to ubiquinone deficiencyOpen Targets
0.33Weak
coenzyme Q10 deficiencyOpen Targets
0.33Weak
stomach diseaseOpen Targets
0.31Weak
type 2 diabetes mellitusOpen Targets
0.31Weak
smoking behaviorOpen Targets
0.29Weak
glaucomaOpen Targets
0.29Weak
response to stimulusOpen Targets
0.27Weak
hidradenitisOpen Targets
0.26Weak
invasive mechanical ventilationOpen Targets
0.26Weak
complex regional pain syndromeOpen Targets
0.24Weak
atrial fibrillationOpen Targets
0.23Weak
cataractOpen Targets
0.19Weak
heart diseaseOpen Targets
0.17Weak
arthritisOpen Targets
0.17Weak
diabetes mellitusOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MYL9Protein interaction99%LURAP1Protein interaction99%RHOAProtein interaction83%RHOQProtein interaction78%CDC42BPBProtein interaction76%CDC42Protein interaction73%
Tissue Expression6 tissues
Heart
100%
Brain
89%
Ovary
67%
Liver
59%
Lung
46%
Bone Marrow
43%
Gene Interaction Network
Click a node to explore
CDC42BPAMYL9LURAP1RHOARHOQCDC42BPBCDC42
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q5VT25
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.46Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.35 [0.26–0.46]
RankingsWhere CDC42BPA stands among ~20K protein-coding genes
  • #4,427of 20,598
    Most Researched107 · top quartile
  • #2,637of 17,882
    Most Constrained (LOEUF)0.46 · top quartile
Genes detectedCDC42BPA
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
2-Deoxyglucose drives plasticity via an adaptive ER stress-ATF4 pathway and elicits stroke recovery and Alzheimer's resilience.
PMID: 37453419
Neuron · 2023
1.00
2
Dysbindin-1 contributes to prefrontal cortical dendritic arbor pathology in schizophrenia.
PMID: 29759351
Schizophr Res · 2018
0.90
3
Comparative Proteomics Analysis Identifies Cdc42-Cdc42BPA Signaling as Prognostic Biomarker and Therapeutic Target for Colon Cancer Invasion.
PMID: 29072916
J Proteome Res · 2018
0.80
4
Identification of metabolic biomarkers in idiopathic pulmonary arterial hypertension using targeted metabolomics and bioinformatics analysis.
PMID: 39455660
Sci Rep · 2024
0.70
5
Tumor-associated macrophage-induced circMRCKα encodes a peptide to promote glycolysis and progression in hepatocellular carcinoma.
PMID: 38642609
Cancer Lett · 2024
0.60