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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CDC50A
cell division cycle 50 P4-ATPase accessory subunit A
Chromosome 6 · 6q14.1
NCBI Gene: 55754Ensembl: ENSG00000112697.18HGNC: HGNC:16667UniProt: Q9NV96
82PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Swiss-Prot Reviewed
atrial fibrillationneoplasmdisorder of earrestless legs syndrome
✦AI Summary

CDC50A functions as an essential accessory subunit for P4-ATPase phospholipid flippases, facilitating the translocation of aminophospholipids from the outer to inner leaflet of cellular membranes 1. As a terminal-glycosylated transmembrane protein, CDC50A is ubiquitously expressed and localizes to various cellular compartments including the trans-Golgi network, secretory vesicles, and plasma membrane 2. The protein's extracellular domain contains evolutionarily conserved residues critical for both chaperoning P4-ATPases to their membrane destinations and inducing their ATP hydrolysis-coupled flippase activity 1. CDC50A forms functional complexes with multiple P4-ATPases including ATP8B1, ATP8B2, ATP10A, and ATP11C, which collectively maintain phospholipid asymmetry essential for cellular homeostasis 34. Loss of CDC50A function disrupts phosphoinositide homeostasis at the plasma membrane and affects natural killer cell-mediated cytotoxicity through altered phosphatidylserine exposure 35. Clinically, CDC50A expression correlates with cancer-initiating cell properties in epithelial ovarian cancer and shorter platinum-free intervals, suggesting its potential as a therapeutic biomarker 6. The protein is also exploited by pathogens like Newcastle disease virus to facilitate viral replication through manipulation of membrane lipid asymmetry 7.

Sources cited
1
CDC50A's extracellular domain is required for chaperoning P4-ATPases and inducing their flippase activity
PMID: 29276178
2
CDC50A is a terminal-glycosylated protein with ubiquitous expression and diverse cellular localizations
PMID: 22253360
3
CDC50A is necessary for P4-ATPase function and maintains phosphoinositide homeostasis
PMID: 39258799
4
CDC50A forms complexes with ATP8B2 and is required for its ER exit and plasma membrane transport
PMID: 39219493
5
TMEM30A/CDC50A deletion affects NK cell cytotoxicity through altered phosphatidylserine exposure
PMID: 38557174
6
CDC50A correlates with cancer-initiating cell properties and clinical prognosis in ovarian cancer
PMID: 35982417
7
CDC50A-ATP11c complex is exploited by Newcastle disease virus for viral replication
PMID: 40812423
Disease Associationsⓘ20
atrial fibrillationOpen Targets
0.31Weak
neoplasmOpen Targets
0.09Suggestive
disorder of earOpen Targets
0.09Suggestive
restless legs syndromeOpen Targets
0.09Suggestive
atrial flutterOpen Targets
0.09Suggestive
sensorineural hearing lossOpen Targets
0.08Suggestive
strokeOpen Targets
0.05Suggestive
ovarian cancerOpen Targets
0.05Suggestive
ischemiaOpen Targets
0.04Suggestive
Abruptio PlacentaeOpen Targets
0.03Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
ovarian neoplasmOpen Targets
0.03Suggestive
cancerOpen Targets
0.03Suggestive
gastrointestinal diseaseOpen Targets
0.03Suggestive
placenta praeviaOpen Targets
0.02Suggestive
spinal cord diseaseOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
obesityOpen Targets
0.02Suggestive
focal segmental glomerulosclerosisOpen Targets
0.02Suggestive
Melnick-Needles syndromeOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ATP8B1Protein interaction100%ATP8A1Protein interaction100%ATP11CProtein interaction100%ATP11AProtein interaction100%ATP10BProtein interaction99%ATP10AProtein interaction99%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
52%
Heart
44%
Lung
41%
Liver
38%
Ovary
26%
Gene Interaction Network
Click a node to explore
CDC50AATP8B1ATP8A1ATP11CATP11AATP10BATP10A
PROTEIN STRUCTURE
Preparing viewer…
PDB8OX6 · 2.39 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.91LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.58 [0.38–0.91]
RankingsWhere CDC50A stands among ~20K protein-coding genes
  • #5,777of 20,598
    Most Researched82
  • #8,216of 17,882
    Most Constrained (LOEUF)0.91
Genes detectedCDC50A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Novel phosphatidylinositol flippases contribute to phosphoinositide homeostasis in the plasma membrane.
PMID: 39258799
Biochem J · 2024
1.00
2
Identification and characterization of CDC50A, CDC50B and CDC50C genes in silico.
PMID: 15375526
Oncol Rep · 2004
0.90
3
Newcastle disease virus exploits the phospholipid flippase ATP11c-CDC50A complex to promote viral infection.
PMID: 40812423
J Biol Chem · 2025
0.80
4
Cellular localization and biochemical analysis of mammalian CDC50A, a glycosylated β-subunit for P4 ATPases.
PMID: 22253360
J Histochem Cytochem · 2012
0.70
5
The CDC50A extracellular domain is required for forming a functional complex with and chaperoning phospholipid flippases to the plasma membrane.
PMID: 29276178
J Biol Chem · 2018
0.60