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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CDH12
cadherin 12
Chromosome 5 · 5p14.3
NCBI Gene: 1010Ensembl: ENSG00000154162.16HGNC: HGNC:1751UniProt: P55289
30PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cell-cell adhesion mediated by cadherinadherens junctioncell morphogenesiscell-cell junction assemblyresponse to antipsychotic drugsmoking initiationstricturedepressive disorder
✦AI Summary

CDH12 (cadherin 12) is a calcium-dependent cell adhesion protein that mediates homophilic cell-cell interactions and contributes to adherens junction organization 1. As a type II classical cadherin, CDH12 functions in cell-cell adhesion, junction assembly, and cell migration 2. In cancer biology, CDH12 plays a complex role in tumor progression. In colorectal cancer, CDH12 promotes proliferation, migration, invasion, and angiogenesis, with elevated expression correlating with invasion depth 2. In thyroid carcinoma, CDH12 mediates invasion and metastasis through epithelial-to-mesenchymal transition (EMT), with its expression regulated by FTO-dependent m6A methylation and IGF2BP2-mediated mRNA stability 3. However, in bladder cancer, CDH12 enrichment predicts superior response to immunotherapy despite chemoresistance, with CDH12-expressing cells exhibiting an undifferentiated, progenitor-like state and expressing PD-L1/PD-L2 4. Genetically, CDH12 variants are associated with neuropsychiatric disorders including bipolar disease, schizophrenia, and methamphetamine/alcohol dependency 1, and a CDH12 locus was identified as significantly associated with antipsychotic drug response in schizophrenia patients 5. CDH12 expression is regulated by DNA methylation in pituitary neuroendocrine tumors 6. These findings suggest CDH12 functions contextually—promoting tumor aggression in solid cancers while paradoxically enhancing immunotherapy responsiveness in bladder cancer.

Sources cited
1
CDH12-enriched bladder cancer tumors exhibit superior response to immunotherapy and express PD-L1/PD-L2 with exhausted T-cells
PMID: 34385456
2
CDH12 promotes invasion and metastasis through EMT pathway in thyroid cancer, regulated by FTO-dependent m6A modification and IGF2BP2 mRNA binding
PMID: 39379360
3
CDH12 is associated with bipolar disease, schizophrenia, and substance dependency; cadherins regulate neural circuit formation and synaptic function
PMID: 22765916
4
CDH12 is underexpressed in ameloblastoma compared to normal tooth germ
PMID: 12147741
5
CDH12 promotes proliferation, migration, invasion, adhesion and angiogenesis in colorectal cancer, with expression correlating to invasion depth
PMID: 24237488
6
CDH12 locus is significantly associated with antipsychotic drug response prediction in schizophrenia patients
PMID: 39562719
7
CDH12 expression is regulated by DNA methylation in somatotroph pituitary neuroendocrine tumors
PMID: 37699356
Disease Associationsⓘ20
response to antipsychotic drugOpen Targets
0.34Weak
smoking initiationOpen Targets
0.34Weak
strictureOpen Targets
0.32Weak
depressive disorderOpen Targets
0.31Weak
Abnormality of the immune systemOpen Targets
0.30Weak
post term pregnancyOpen Targets
0.29Weak
tooth diseaseOpen Targets
0.29Weak
autoimmune thyroid diseaseOpen Targets
0.29Weak
injuryOpen Targets
0.29Weak
alcohol drinkingOpen Targets
0.28Weak
bacteriemiaOpen Targets
0.28Weak
bone neoplasmOpen Targets
0.28Weak
knee fractureOpen Targets
0.28Weak
liver diseaseOpen Targets
0.28Weak
colorectal cancerOpen Targets
0.28Weak
response to antihypertensive drugOpen Targets
0.27Weak
acquired thrombocytopeniaOpen Targets
0.25Weak
cervical carcinomaOpen Targets
0.25Weak
connective tissue neoplasmOpen Targets
0.25Weak
psoriatic arthritisOpen Targets
0.25Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CDH4Shared pathway100%CDH22Shared pathway100%CDH26Shared pathway100%CTNNA2Protein interaction97%CDHR3Shared pathway89%CDH24Protein interaction89%
Tissue Expression6 tissues
Brain
100%
Liver
7%
Ovary
4%
Lung
2%
Bone Marrow
1%
Heart
0%
Gene Interaction Network
Click a node to explore
CDH12CDH4CDH22CDH26CTNNA2CDHR3CDH24
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P55289
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.67LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.48 [0.36–0.67]
RankingsWhere CDH12 stands among ~20K protein-coding genes
  • #11,874of 20,598
    Most Researched30
  • #4,916of 17,882
    Most Constrained (LOEUF)0.67
Genes detectedCDH12
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
An N-Cadherin 2 expressing epithelial cell subpopulation predicts response to surgery, chemotherapy and immunotherapy in bladder cancer.
PMID: 34385456
Nat Commun · 2021
1.00
2
FTO/IGF2BP2-mediated N6 methyladenosine modification in invasion and metastasis of thyroid carcinoma via CDH12.
PMID: 39379360
Cell Death Dis · 2024
0.90
3
Cadherins and neuropsychiatric disorders.
PMID: 22765916
Brain Res · 2012
0.80
4
Gene expression profiling of ameloblastoma and human tooth germ by means of a cDNA microarray.
PMID: 12147741
J Dent Res · 2002
0.70
5
Identification of Novel Genetic Risk Factors for Focal Segmental Glomerulosclerosis in Children: Results From the Chronic Kidney Disease in Children (CKiD) Cohort.
PMID: 36623684
Am J Kidney Dis · 2023
0.60