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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CDH23
cadherin related 23
Chromosome 10 Β· 10q22.1
NCBI Gene: 64072Ensembl: ENSG00000107736.22HGNC: HGNC:13733UniProt: A0A087WYR8
99PubMed Papers
24Diseases
0Drugs
723Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
sensory perception of light stimulusphotoreceptor cell maintenanceregulation of cytosolic calcium ion concentrationsensory perception of soundUsher syndrome type 1hearing loss, autosomal recessiveUsher syndromedeafness
✦AI Summary

CDH23 (cadherin related 23) is a calcium-dependent cell adhesion protein essential for hearing and balance. Functionally, CDH23 is required for establishing and maintaining proper stereocilia bundle organization in cochlear and vestibular hair cells during late embryonic and early postnatal development 1. It operates within the USH1 protein interactome alongside USH1C, USH1G, and MYO7A to mediate mechanotransduction in cochlear hair cells 2. CDH23 mutations cause a broad phenotypic spectrum of sensorineural hearing loss, ranging from non-syndromic autosomal recessive deafness (DFNB12) to syndromic Usher syndrome type 1D (USH1D), characterized by congenital to progressive, age-related hearing impairment 3. Clinically, CDH23 ranks among the most important deafness genes in East Asian populations, with detection rates exceeding 10 cases in large patient cohorts 4. In USH1, MYO7A is the predominant causative gene (60% of cases), while CDH23 mutations contribute significantly to the disease burden 5. Genotype-phenotype correlations show that specific variant combinations predict disease severity and age of onset, with residual CDH23 function determining clinical presentation 3. These findings establish CDH23 as a critical gene for inner ear development and function, with mutations causing approximately 10-15% of genetic hearing loss cases in diverse populations.

Sources cited
1
CDH23 is essential for correct development and maintenance of stereocilia structure in the organ of Corti
PMID: 34201633
2
CDH23 is a core USH1 gene encoding proteins in the Usher interactome
PMID: 35353227
3
CDH23 variants cause broad spectrum from non-syndromic DFNB12 to syndromic USH1D, from congenital to age-related hearing loss with genotype-phenotype correlation
PMID: 35020051
4
CDH23 is among the most common deafness genes in Chinese cohorts with detection in >10 cases
PMID: 36597107
5
CDH23 mutations contribute to Usher syndrome pathology with distinct mutation spectrum in Chinese populations
PMID: 29625443
Disease Associationsβ“˜24
Usher syndrome type 1Open Targets
0.77Strong
hearing loss, autosomal recessiveOpen Targets
0.75Strong
Usher syndromeOpen Targets
0.75Strong
deafnessOpen Targets
0.74Strong
Pituitary Gland AdenomaOpen Targets
0.62Moderate
nonsyndromic genetic hearing lossOpen Targets
0.59Moderate
pituitary adenoma 5, multiple typesOpen Targets
0.57Moderate
Rare genetic deafnessOpen Targets
0.56Moderate
Retinal dystrophyOpen Targets
0.55Moderate
Sensorineural hearing impairmentOpen Targets
0.54Moderate
autosomal dominant nonsyndromic hearing lossOpen Targets
0.53Moderate
Joubert syndrome and related disordersOpen Targets
0.53Moderate
genetic disorderOpen Targets
0.51Moderate
hearing lossOpen Targets
0.51Moderate
sensorineural hearing lossOpen Targets
0.46Moderate
retinitis pigmentosaOpen Targets
0.44Moderate
Usher syndrome type 2Open Targets
0.43Moderate
Hearing impairmentOpen Targets
0.41Moderate
age-related hearing impairmentOpen Targets
0.41Moderate
Non-syndromic genetic deafnessOpen Targets
0.39Weak
Deafness, autosomal recessive, 12UniProt
Pituitary adenoma 5, multiple typesUniProt
Usher syndrome 1DUniProt
Usher syndrome 1D/FUniProt
Pathogenic Variants723
NM_022124.6(CDH23):c.380A>G (p.Asp127Gly)Likely pathogenic
Rare genetic deafness|Usher syndrome|Autosomal recessive nonsyndromic hearing loss 12|Pituitary adenoma 5, multiple types|Usher syndrome type 1
β˜…β˜…β˜…β˜†2023β†’ Residue 127
NM_022124.6(CDH23):c.2866G>A (p.Glu956Lys)Pathogenic
not provided|Autosomal recessive nonsyndromic hearing loss 12|Sensorineural hearing loss disorder|Hearing loss, autosomal recessive|Pituitary adenoma 5, multiple types|Autosomal recessive nonsyndromic hearing loss 12;Pituitary adenoma 5, multiple types;Usher syndrome type 1D|Usher syndrome type 1
β˜…β˜…β˜…β˜†2023β†’ Residue 956
NM_022124.6(CDH23):c.6085C>T (p.Arg2029Trp)Pathogenic
Autosomal recessive nonsyndromic hearing loss 12|not provided|Nonsyndromic genetic hearing loss|Pituitary adenoma 5, multiple types|Usher syndrome type 1D|Usher syndrome type 1D;Pituitary adenoma 5, multiple types;Autosomal recessive nonsyndromic hearing loss 12|Syndromic retinitis pigmentosa|Usher syndrome type 1
β˜…β˜…β˜…β˜†2023β†’ Residue 2029
NM_022124.6(CDH23):c.719C>T (p.Pro240Leu)Pathogenic
Autosomal recessive nonsyndromic hearing loss 12|Usher syndrome type 1D|not provided|Usher syndrome type 1|autosomal recessive CDH23-related disorders|Nonsyndromic genetic hearing loss|Pituitary adenoma 5, multiple types;Usher syndrome type 1D;Autosomal recessive nonsyndromic hearing loss 12|Pituitary adenoma 5, multiple types
β˜…β˜…β˜…β˜†2019β†’ Residue 240
NM_022124.6(CDH23):c.6050-15G>APathogenic
not specified|Retinal dystrophy|Usher syndrome type 1D|not provided|Pituitary adenoma 5, multiple types|Usher syndrome type 1D;Pituitary adenoma 5, multiple types;Autosomal recessive nonsyndromic hearing loss 12
β˜…β˜…β˜†β˜†2026
NM_022124.6(CDH23):c.6442G>A (p.Asp2148Asn)Pathogenic
Autosomal recessive nonsyndromic hearing loss 12|Usher syndrome type 2A;Autosomal recessive nonsyndromic hearing loss 12|Rare genetic deafness|Usher syndrome type 1|not provided|Usher syndrome|Pituitary adenoma 5, multiple types|CDH23-related disorder|Retinal dystrophy|Usher syndrome type 1D|Pituitary adenoma 5, multiple types;Usher syndrome type 1D;Autosomal recessive nonsyndromic hearing loss 12|Monogenic hearing loss
β˜…β˜…β˜†β˜†2026β†’ Residue 2148
NM_022124.6(CDH23):c.5311C>T (p.Arg1771Ter)Pathogenic
Usher syndrome type 1|not provided|Usher syndrome type 1D;Pituitary adenoma 5, multiple types;Autosomal recessive nonsyndromic hearing loss 12|Pituitary adenoma 5, multiple types
β˜…β˜…β˜†β˜†2026β†’ Residue 1771
NM_022124.6(CDH23):c.5237G>A (p.Arg1746Gln)Pathogenic
Usher syndrome type 1D|not provided|Pituitary adenoma 5, multiple types;Usher syndrome type 1D;Autosomal recessive nonsyndromic hearing loss 12|Retinal dystrophy|Rare genetic deafness|Usher syndrome|Autosomal recessive nonsyndromic hearing loss 12|Usher syndrome type 1|Childhood onset hearing loss|Inborn genetic diseases|Pituitary adenoma 5, multiple types|CDH23-related disorder|Retinal disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 1746
NM_022124.6(CDH23):c.2161_2166delinsGTGA (p.Ile721fs)Likely pathogenic
Pituitary adenoma 5, multiple types|Usher syndrome type 1
β˜…β˜…β˜†β˜†2026β†’ Residue 721
NM_022124.6(CDH23):c.7086C>G (p.Tyr2362Ter)Pathogenic
Usher syndrome|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 2362
NM_022124.6(CDH23):c.9629_9632del (p.Ile3210fs)Pathogenic
Rare genetic deafness|not provided|Usher syndrome type 1|Pituitary adenoma 5, multiple types
β˜…β˜…β˜†β˜†2026β†’ Residue 3210
NM_022124.6(CDH23):c.6696del (p.Ala2232_Val2233insTer)Pathogenic
not provided|Pituitary adenoma 5, multiple types|Pituitary adenoma 5, multiple types;Autosomal recessive nonsyndromic hearing loss 12;Usher syndrome type 1D|Retinal dystrophy|Usher syndrome type 1
β˜…β˜…β˜†β˜†2026β†’ Residue 2232
NM_022124.6(CDH23):c.2289+1G>APathogenic
Usher syndrome type 1D|Rare genetic deafness|Usher syndrome type 1|not provided|Pituitary adenoma 5, multiple types|Autosomal recessive nonsyndromic hearing loss 12;Usher syndrome type 1D;Pituitary adenoma 5, multiple types
β˜…β˜…β˜†β˜†2026
NM_022124.6(CDH23):c.4562A>G (p.Asn1521Ser)Pathogenic
Autosomal recessive nonsyndromic hearing loss 12|Ear malformation|not provided|Pituitary adenoma 5, multiple types|Usher syndrome type 1D;Autosomal recessive nonsyndromic hearing loss 12;Pituitary adenoma 5, multiple types|Usher syndrome type 1
β˜…β˜…β˜†β˜†2026β†’ Residue 1521
NM_022124.6(CDH23):c.5369-1G>ALikely pathogenic
Usher syndrome type 1;Usher syndrome type 1D|not provided
β˜…β˜…β˜†β˜†2026
NM_022124.6(CDH23):c.4206+1G>ALikely pathogenic
not provided|Usher syndrome type 1|Pituitary adenoma 5, multiple types
β˜…β˜…β˜†β˜†2026
NM_022124.6(CDH23):c.7362G>A (p.Thr2454=)Pathogenic
Rare genetic deafness|not provided|Usher syndrome type 1|Usher syndrome type 1D|Usher syndrome|Retinal dystrophy|Pituitary adenoma 5, multiple types
β˜…β˜…β˜†β˜†2026β†’ Residue 2454
NM_022124.6(CDH23):c.6050-9G>APathogenic
Rare genetic deafness|not provided|Usher syndrome type 1D;Pituitary adenoma 5, multiple types;Autosomal recessive nonsyndromic hearing loss 12|Usher syndrome type 1|Hearing loss, autosomal recessive|Pituitary adenoma 5, multiple types|Retinal dystrophy|CDH23-related disorder|Usher syndrome type 1D
β˜…β˜…β˜†β˜†2026
NM_022124.6(CDH23):c.5584G>A (p.Glu1862Lys)Likely pathogenic
Usher syndrome type 1D|not provided|Pituitary adenoma 5, multiple types
β˜…β˜…β˜†β˜†2026β†’ Residue 1862
NM_022124.6(CDH23):c.1112_1115del (p.Ile371fs)Pathogenic
Pituitary adenoma 5, multiple types|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 371
View on ClinVar β†—
Related Genes
GJB2Protein interaction100%CIB2Protein interaction100%CDHR5Protein interaction100%PDZD7Protein interaction92%ATP2B2Protein interaction90%MYO7AProtein interaction86%
Tissue Expression6 tissues
Ovary
100%
Liver
22%
Lung
17%
Bone Marrow
15%
Heart
12%
Brain
5%
Gene Interaction Network
Click a node to explore
CDH23GJB2CIB2CDHR5PDZD7ATP2B2MYO7A
PROTEIN STRUCTURE
Preparing viewer…
PDB5WJ8 Β· 1.86 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.69LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.60 [0.54–0.69]
RankingsWhere CDH23 stands among ~20K protein-coding genes
  • #4,825of 20,598
    Most Researched99 Β· top quartile
  • #65of 5,498
    Most Pathogenic Variants723 Β· top 5%
  • #5,133of 17,882
    Most Constrained (LOEUF)0.69
Genes detectedCDH23
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Genetic screening of a Chinese cohort of children with hearing loss using a next-generation sequencing panel.
PMID: 36597107
Hum Genomics Β· 2023
1.00
2
Comprehensive Molecular Screening in Chinese Usher Syndrome Patients.
PMID: 29625443
Invest Ophthalmol Vis Sci Β· 2018
0.90
3
Targeted exon sequencing successfully discovers rare causative genes and clarifies the molecular epidemiology of Japanese deafness patients.
PMID: 23967202
PLoS One Β· 2013
0.80
4
Usher Syndrome: Genetics of a Human Ciliopathy.
PMID: 34201633
Int J Mol Sci Β· 2021
0.70
5
The genetic and phenotypic landscapes of Usher syndrome: from disease mechanisms to a new classification.
PMID: 35353227
Hum Genet Β· 2022
0.60