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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CDK16
cyclin dependent kinase 16
Chromosome X · Xp11.3
NCBI Gene: 5127Ensembl: ENSG00000102225.18HGNC: HGNC:8749UniProt: A0A140VK97
100PubMed Papers
20Diseases
4Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedKinase
CLINICAL
Clinical Trials
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein serine/threonine kinase activitycytoplasmic side of plasma membranepositive regulation of autophagyprotein bindingIntellectual disabilityAbnormal sperm morphologyoligospermiaReduced sperm motility
✦AI Summary

CDK16 (cyclin-dependent kinase 16) is a protein kinase that functions as an oncogene in multiple cancer types and plays roles in cellular processes including cell cycle regulation, vesicle trafficking, and tissue repair. CDK16 is significantly overexpressed in various cancers including non-small cell lung cancer 1, hepatocellular carcinoma 2, and breast cancer 3, where it promotes tumor progression through multiple mechanisms. In lung cancer, CDK16 enhances cell proliferation and inhibits apoptosis by phosphorylating p27 at Ser10, leading to p27 degradation via ubiquitination 1. CDK16 also promotes radioresistance by binding to and phosphorylating p53 at Ser315, resulting in p53 degradation and suppressed DNA damage response 4. In hepatocellular carcinoma, CDK16 activates β-catenin signaling to promote epithelial-mesenchymal transition and invasion 2. Beyond cancer, CDK16 contributes to tissue repair processes, as demonstrated in dermal fibroblasts where it promotes extracellular matrix synthesis and cell viability following thermal injury 5. CDK16 has emerged as a biomarker for poor prognosis across cancers and creates an immunosuppressive tumor microenvironment that reduces response to immunotherapy 6. Additionally, CDK16 variants have been identified as potential candidates for X-linked intellectual disability 7.

Sources cited
1
CDK16 is overexpressed in NSCLC and promotes proliferation/inhibits apoptosis via p27 phosphorylation and degradation
PMID: 29674275
2
CDK16 is upregulated in hepatocellular carcinoma and promotes tumor progression through β-catenin signaling activation
PMID: 28716136
3
CDK16+ tumor cells in breast cancer are associated with chemotherapy resistance and interact with cancer-associated fibroblasts
PMID: 39930931
4
CDK16 phosphorylates p53 at Ser315 leading to p53 degradation and promoting radioresistance in lung cancer
PMID: 29344296
5
CDK16 is a pan-cancer prognostic biomarker that creates immunosuppressive microenvironment and reduces immunotherapy response
PMID: 38261737
6
CDK16 promotes extracellular matrix synthesis and cell viability in dermal fibroblasts after thermal injury
PMID: 34149889
7
CDK16 variants identified as potential candidates for X-linked intellectual disability
PMID: 25644381
Disease Associationsⓘ20
Intellectual disabilityOpen Targets
0.37Weak
Abnormal sperm morphologyOpen Targets
0.30Weak
oligospermiaOpen Targets
0.30Weak
Reduced sperm motilityOpen Targets
0.30Weak
X-linked intellectual disability-spastic quadriparesis syndromeOpen Targets
0.18Weak
neoplasmOpen Targets
0.13Weak
azoospermiaOpen Targets
0.10Weak
small cell lung carcinomaOpen Targets
0.10Suggestive
cancerOpen Targets
0.10Suggestive
lung cancerOpen Targets
0.09Suggestive
melanomaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
triple-negative breast cancerOpen Targets
0.08Suggestive
partial chromosome Y deletionOpen Targets
0.08Suggestive
chronic lymphocytic leukemiaOpen Targets
0.08Suggestive
Mantle cell lymphomaOpen Targets
0.07Suggestive
spermatogenic failure 72Open Targets
0.07Suggestive
spermatogenic failure, X-linked, 5Open Targets
0.07Suggestive
spermatogenic failure 65Open Targets
0.07Suggestive
Pathogenic Variants1
NM_006201.5(CDK16):c.43C>T (p.Leu15Phe)Likely pathogenic
Oligospermia;Reduced sperm motility;Abnormal sperm morphology
★☆☆☆→ Residue 15
View on ClinVar ↗
Drug Targets4
AT-7519Phase II
Cyclin-dependent kinase inhibitor
chronic lymphocytic leukemia
AZD-5438Phase I
Cyclin-dependent kinase inhibitor
PHA-793887Phase I
Cyclin-dependent kinase inhibitor
RONICICLIBPhase II
Cyclin-dependent kinase inhibitor
small cell lung carcinoma
Related Genes
CCNYL1Protein interaction96%TDRD7Protein interaction71%CCNYProtein interaction68%CDK17Shared pathway25%TESK2Shared pathway20%PRKAG1Shared pathway15%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
83%
Brain
53%
Lung
52%
Ovary
49%
Liver
34%
Gene Interaction Network
Click a node to explore
CDK16CCNYL1TDRD7CCNYCDK17TESK2PRKAG1
PROTEIN STRUCTURE
Preparing viewer…
PDB5G6V · 2.20 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.15Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.05 [0.02–0.15]
RankingsWhere CDK16 stands among ~20K protein-coding genes
  • #4,770of 20,598
    Most Researched100 · top quartile
  • #4,883of 5,498
    Most Pathogenic Variants1
  • #217of 17,882
    Most Constrained (LOEUF)0.15 · top 5%
Genes detectedCDK16
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The roles, molecular interactions, and therapeutic value of CDK16 in human cancers.
PMID: 37236028
Biomed Pharmacother · 2023
1.00
2
X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes.
PMID: 25644381
Mol Psychiatry · 2016
0.90
3
CDK16
PMID: 39930931
Small Methods · 2025
0.80
4
CDK16 as a potential prognostic biomarker correlated with an immunosuppressive tumor microenvironment and benefits in enhancing the effectiveness of immunotherapy in human cancers.
PMID: 38261737
Aging (Albany NY) · 2024
0.70
5
CDK16 overexpressed in non-small cell lung cancer and regulates cancer cell growth and apoptosis via a p27-dependent mechanism.
PMID: 29674275
Biomed Pharmacother · 2018
0.60