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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CHRNA6
cholinergic receptor nicotinic alpha 6 subunit
Chromosome 8 · 8p11.21
NCBI Gene: 8973Ensembl: ENSG00000147434.9HGNC: HGNC:15963UniProt: Q15825
58PubMed Papers
20Diseases
1Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Ion ChannelReceptorTransporter
CLINICAL
Clinical Trials
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
acetylcholine receptor signaling pathwayprotein bindingacetylcholine-gated monoatomic cation-selective channel activityacetylcholine-gated channel complexattention deficit hyperactivity disorderAlzheimer diseasecancerschizophrenia
✦AI Summary

CHR8 encodes the α6 subunit of neuronal nicotinic acetylcholine receptors (nAChRs), which function as pentameric, ligand-gated ion channels with high calcium permeability 1. The α6 subunit forms functional channels with other subunits (CHR8, CHR8, CHR8) that exhibit high sensitivity to acetylcholine and nicotine and are predominantly expressed in dopaminergic neurons, norepinephrine neurons, and visual system cells 1. These α6-containing receptors are crucial for nicotine-induced behaviors and addiction, as they mediate cholinergic modulation of dopamine and GABA release at nerve terminals 2. Genetic variants in CHR8, particularly the rs2304297 polymorphism in the 3'-UTR, significantly impact nicotine dependence and smoking behavior in a sex- and genotype-dependent manner 34. The GG genotype enhances nicotine plus cue-primed reinstatement behavior in adolescent male rats and affects dopamine and norepinephrine tissue levels in limbic brain regions 5. Beyond addiction, CHR8 shows potential clinical significance in small cell lung cancer, where its expression correlates with immune cell infiltration and may serve as a predictive biomarker for immunotherapy response 6. The gene also shows altered expression in suicide victims, suggesting broader roles in neuropsychiatric conditions 7.

Sources cited
1
CHRNA6 forms pentameric channels with other subunits that exhibit high sensitivity to ACh and nicotine, expressed in specific brain regions
PMID: 16835356
2
α6-containing nAChRs in ventral tegmental area control nicotine self-administration and are crucial for nicotine dependence
PMID: 27327258
3
Human CHRNA6 3'-UTR SNP (rs2304297) affects nicotine-induced behaviors in genotype- and sex-specific manner
PMID: 35328565
4
GG genotype of rs2304297 enhances nicotine plus cue-primed reinstatement in adolescent male rats
PMID: 36704741
5
CHRNA6 3'-UTR SNP influences dopamine and norepinephrine tissue levels in brain reward regions
PMID: 38612487
6
CHRNA6 expression correlates with immune cell infiltration and may predict immunotherapy response in small cell lung cancer
PMID: 39398083
7
CHRNA6 shows altered expression in suicide victims, suggesting involvement in neuropsychiatric conditions
PMID: 34552157
Disease Associationsⓘ20
attention deficit hyperactivity disorderOpen Targets
0.11Weak
Alzheimer diseaseOpen Targets
0.10Weak
cancerOpen Targets
0.08Suggestive
schizophreniaOpen Targets
0.07Suggestive
anxiety disorderOpen Targets
0.07Suggestive
dementiaOpen Targets
0.07Suggestive
small cell lung carcinomaOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.06Suggestive
smoking cessationOpen Targets
0.05Suggestive
Norrie diseaseOpen Targets
0.05Suggestive
colorectal adenocarcinomaOpen Targets
0.04Suggestive
nicotine dependenceOpen Targets
0.04Suggestive
breast cancerOpen Targets
0.03Suggestive
keratoconjunctivitisOpen Targets
0.02Suggestive
breast carcinomaOpen Targets
0.02Suggestive
AnxietyOpen Targets
0.02Suggestive
psoriasisOpen Targets
0.02Suggestive
lung adenocarcinomaOpen Targets
0.02Suggestive
pancreatic adenocarcinomaOpen Targets
0.01Suggestive
lung cancerOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets1
POZANICLINEPhase II
Nicotinic acetylcholine receptor alpha4/beta2/alpha5 partial agonist
anxiety disorder
Related Genes
JAK2Protein interaction90%CHRNA5Shared pathway78%CHRNDProtein interaction77%CHRNEProtein interaction77%CHRNA2Protein interaction76%CYP2A6Protein interaction73%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
25%
Lung
0%
Heart
0%
Ovary
0%
Liver
0%
Gene Interaction Network
Click a node to explore
CHRNA6JAK2CHRNA5CHRNDCHRNECHRNA2CYP2A6
PROTEIN STRUCTURE
Preparing viewer…
PDB8ZRN · 3.25 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.05LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.76 [0.56–1.05]
RankingsWhere CHRNA6 stands among ~20K protein-coding genes
  • #7,846of 20,598
    Most Researched58
  • #10,550of 17,882
    Most Constrained (LOEUF)1.05
Genes detectedCHRNA6
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Sex- and Genotype-Dependent Nicotine-Induced Behaviors in Adolescent Rats with a Human Polymorphism (rs2304297) in the 3'-UTR of the
PMID: 35328565
Int J Mol Sci · 2022
1.00
2
Crucial roles of the CHRNB3-CHRNA6 gene cluster on chromosome 8 in nicotine dependence: update and subjects for future research.
PMID: 27327258
Transl Psychiatry · 2016
0.90
3
Combined effect between CHRNB3-CHRNA6 region gene variant (rs6474412) and smoking in psoriasis vulgaris severity.
PMID: 24792900
Gene · 2014
0.80
4
Sex- and genotype-dependent nicotine plus cue-primed reinstatement is enhanced in adolescent Sprague Dawley rats containing the human
PMID: 36704741
Front Psychiatry · 2022
0.70
5
Potential immunologic and prognostic roles of CHRNA6 in SCLC and pan-cancer.
PMID: 39398083
Heliyon · 2024
0.60