HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CIB1
calcium and integrin binding 1
Chromosome 15 Β· 15q26.1
NCBI Gene: 10519Ensembl: ENSG00000185043.14HGNC: HGNC:16920UniProt: A0A140VK09
103PubMed Papers
21Diseases
0Drugs
15Pathogenic Variants
FUNCTIONAL ROLE
Apoptosis
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
perinuclear region of cytoplasmpositive regulation of substrate adhesion-dependent cell spreadingpositive regulation of protein localization to plasma membranecellular response to nerve growth factor stimulusepidermodysplasia verruciformisneurodegenerative diseasecoronary artery diseaseneoplasm
✦AI Summary

CIB1 (calcium and integrin-binding protein 1) is a small, ubiquitously expressed EF-hand calcium-binding protein that functions as a molecular adaptor regulating multiple cellular processes 1. Structurally, CIB1 contains a hydrophobic cleft that mediates interactions with numerous signaling partners including PAK1, ASK1, and PLK3 1. In calcium signaling, apo-CIB1 restrains premature integrin Ξ±IIbΞ²3 activation, while Ca2+-bound CIB1 recruits focal-adhesion kinase and amplifies cytoskeletal remodeling 2. CIB1 supports oncogenic PI3K/AKT and MEK/ERK pathways without possessing intrinsic enzymatic activity 1. In cancer, CIB1 promotes tumor progression through dual mechanisms: enhancing cell proliferation and survival via ERK1/2 and PI3K/AKT signaling, while also inhibiting apoptosis and mediating cell migration and angiogenesis 3. Clinically, CIB1 stabilization via USP14-mediated deubiquitination drives lenvatinib resistance in hepatocellular carcinoma through PAK1-ERK1/2 activation, identifying CIB1 as a therapeutic target 4. CIB1 is also upregulated under endoplasmic reticulum stress in pancreatic Ξ²-cells, suggesting relevance to diabetes pathogenesis 5. The CIB1-Ξ±IIbΞ²3 interface represents a selective antithrombotic checkpoint, with peptide and small-molecule inhibitors showing promise as antiplatelet agents 2.

Sources cited
1
CIB1 structure, calcium binding, multiple binding partners (PAK1, ASK1, PLK3), and support of PI3K/AKT and MEK/ERK pathways
PMID: 27118676
2
CIB1 regulation of platelet integrin Ξ±IIbΞ²3, calcium-dependent conformational changes, and antithrombotic potential
PMID: 40929801
3
CIB1 roles in cancer including cell proliferation, apoptosis, migration, angiogenesis, and binding to multiple signaling proteins
PMID: 29017172
4
USP14-mediated CIB1 deubiquitination and stabilization driving lenvatinib resistance via PAK1-ERK1/2 axis in hepatocellular carcinoma
PMID: 38993552
5
CIB1 upregulation under endoplasmic reticulum stress in pancreatic islet cells relevant to diabetes
PMID: 38956087
Disease Associationsβ“˜21
epidermodysplasia verruciformisOpen Targets
0.54Moderate
neurodegenerative diseaseOpen Targets
0.52Moderate
coronary artery diseaseOpen Targets
0.14Weak
neoplasmOpen Targets
0.10Suggestive
azoospermiaOpen Targets
0.10Suggestive
partial chromosome Y deletionOpen Targets
0.09Suggestive
triple-negative breast cancerOpen Targets
0.09Suggestive
Male infertility with spermatogenesis disorder due to single gene mutationOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
Pallister-Hall syndromeOpen Targets
0.08Suggestive
spermatogenic failure 57Open Targets
0.08Suggestive
spermatogenic failure 50Open Targets
0.08Suggestive
spermatogenic failure 59Open Targets
0.07Suggestive
spermatogenic failure 60Open Targets
0.07Suggestive
spermatogenic failure 73Open Targets
0.07Suggestive
spermatogenic failure 74Open Targets
0.07Suggestive
spermatogenic failure 61Open Targets
0.07Suggestive
spermatogenic failure 62Open Targets
0.07Suggestive
spermatogenic failure 88Open Targets
0.07Suggestive
spermatogenic failure 25Open Targets
0.07Suggestive
Epidermodysplasia verruciformis 3UniProt
Pathogenic Variants15
NM_006384.4(CIB1):c.235_239del (p.Thr79fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 79
NM_006384.4(CIB1):c.132del (p.Ser44fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 44
NM_006384.4(CIB1):c.87-29_87-20delPathogenic
not provided
β˜…β˜†β˜†β˜†2025
NM_006384.4(CIB1):c.52-2A>GPathogenic
Epidermodysplasia verruciformis, susceptibility to, 3|not provided
β˜…β˜†β˜†β˜†2025
NM_006384.4(CIB1):c.8del (p.Gly3fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 3
NM_006384.4(CIB1):c.214C>T (p.Arg72Ter)Pathogenic
Epidermodysplasia verruciformis, susceptibility to, 3|not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 72
NM_006384.4(CIB1):c.465+1delLikely pathogenic
Susceptibility to severe COVID-19
β˜…β˜†β˜†β˜†2024
NM_006384.4(CIB1):c.461del (p.Asp154fs)Likely pathogenic
Susceptibility to severe COVID-19
β˜…β˜†β˜†β˜†2024β†’ Residue 154
NM_006384.4(CIB1):c.413_414del (p.Glu138fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 138
NM_006384.4(CIB1):c.465+1G>ALikely pathogenic
Epidermodysplasia verruciformis, susceptibility to, 3
β˜…β˜†β˜†β˜†2024
NM_006384.4(CIB1):c.87-121G>TLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2024
NM_006384.4(CIB1):c.242dup (p.Ala82fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 82
NM_006384.4(CIB1):c.7_8del (p.Gly3fs)Likely pathogenic
Epidermodysplasia verruciformis, susceptibility to, 3
β˜…β˜†β˜†β˜†2023β†’ Residue 3
NM_006384.4(CIB1):c.87-111C>GPathogenic
not provided
β˜…β˜†β˜†β˜†2022
NM_006384.4(CIB1):c.350_351del (p.Asp116_Phe117insTer)Pathogenic
not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 116
View on ClinVar β†—
Related Genes
CCNL2Protein interaction100%CDK2Protein interaction100%CRY2Protein interaction100%ITGA2BProtein interaction98%PSEN2Protein interaction96%ATG13Protein interaction93%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
86%
Lung
56%
Heart
44%
Ovary
27%
Brain
16%
Gene Interaction Network
Click a node to explore
CIB1CCNL2CDK2CRY2ITGA2BPSEN2ATG13
PROTEIN STRUCTURE
Preparing viewer…
PDB6OCX Β· 1.90 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.23LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.84 [0.58–1.23]
RankingsWhere CIB1 stands among ~20K protein-coding genes
  • #4,638of 20,598
    Most Researched103 Β· top quartile
  • #2,448of 5,498
    Most Pathogenic Variants15
  • #12,980of 17,882
    Most Constrained (LOEUF)1.23
Genes detectedCIB1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
ATM, ATR, and DNA-PK: The Trinity at the Heart of the DNA Damage Response.
PMID: 28622525
Mol Cell Β· 2017
1.00
2
Deubiquitination of CIB1 by USP14 promotes lenvatinib resistance via the PAK1-ERK1/2 axis in hepatocellular carcinoma.
PMID: 38993552
Int J Biol Sci Β· 2024
0.90
3
The Emerging Roles of CIB1 in Cancer.
PMID: 29017172
Cell Physiol Biochem Β· 2017
0.80
4
CIB1: a small protein with big ambitions.
PMID: 27118676
FASEB J Β· 2016
0.70
5
CIB1 and platelet integrin Ξ±IIbΞ²3: Molecular mechanisms, disruption strategies and antithrombotic opportunities.
PMID: 40929801
Thromb Res Β· 2025
0.60