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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CLDN11
claudin 11
Chromosome 3 · 3q26.2
NCBI Gene: 5010Ensembl: ENSG00000013297.13HGNC: HGNC:8514UniProt: O75508
54PubMed Papers
21Diseases
0Drugs
2Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cell junctiontight junctionidentical protein bindingneurofilamentleukodystrophy, hypomyelinating, 22prostate carcinomamarfanoid habitus and intellectual disabilityprostate cancer
✦AI Summary

CLDN11 (claudin 11) is a tight junction protein that plays crucial roles in maintaining intercellular barrier integrity and regulating cellular functions across multiple tissues. The protein functions primarily through calcium-independent cell-cell adhesion and tight junction formation 1. In cancer biology, CLDN11 exhibits complex roles depending on cellular context. It acts as a tumor suppressor in nasopharyngeal carcinoma, where hypermethylation-mediated silencing promotes cell migration through interactions with tubulins TUBA1B and TUBB3, blocking tubulin polymerization 2. Conversely, CLDN11 promotes gastric cancer metastasis when secreted by CXCR7-positive fibroblasts via AKT pathway activation 3 and serves as a lymph node metastasis marker along with CCL21 4. In reproductive biology, CLDN11 regulates granulosa cell proliferation in polycystic ovary syndrome through PI3K-AKT signaling pathway activation, controlling CCND1 and PCNA expression 5. The protein's stability is regulated by IGF2BP3-mediated mRNA binding, which can be disrupted by TNF-α, leading to increased intestinal permeability in obesity-related severe acute pancreatitis 1. These findings highlight CLDN11's multifaceted roles in barrier function, cancer progression, and reproductive health.

Sources cited
1
CLDN11 functions through calcium-independent cell-cell adhesion and its mRNA stability is regulated by IGF2BP3, disrupted by TNF-α
PMID: 39856555
2
CLDN11 acts as tumor suppressor in nasopharyngeal carcinoma, interacting with tubulins TUBA1B and TUBB3 to block tubulin polymerization and cell migration
PMID: 29747653
3
CLDN11 promotes gastric cancer metastasis when secreted by CXCR7-positive fibroblasts via AKT pathway activation
PMID: 38335659
4
CLDN11 serves as a lymph node metastasis marker in gastric cancer along with CCL21
PMID: 38553809
5
CLDN11 regulates granulosa cell proliferation in PCOS through PI3K-AKT signaling pathway, controlling CCND1 and PCNA expression
PMID: 39875531
Disease Associationsⓘ21
leukodystrophy, hypomyelinating, 22Open Targets
0.68Moderate
prostate carcinomaOpen Targets
0.38Weak
marfanoid habitus and intellectual disabilityOpen Targets
0.12Weak
prostate cancerOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.09Suggestive
breast cancerOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
polycystic ovary syndromeOpen Targets
0.08Suggestive
nasopharyngeal carcinomaOpen Targets
0.08Suggestive
Miyoshi myopathyOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
deafnessOpen Targets
0.06Suggestive
insomniaOpen Targets
0.06Suggestive
autosomal dominant nonsyndromic hearing lossOpen Targets
0.06Suggestive
obesityOpen Targets
0.06Suggestive
melanomaOpen Targets
0.06Suggestive
hearing loss, autosomal recessiveOpen Targets
0.06Suggestive
laryngeal squamous cell carcinomaOpen Targets
0.06Suggestive
deafness-infertility syndromeOpen Targets
0.05Suggestive
azoospermiaOpen Targets
0.05Suggestive
Leukodystrophy, hypomyelinating, 22UniProt
Pathogenic Variants2
NM_005602.6(CLDN11):c.622T>C (p.Ter208Gln)Pathogenic
Leukodystrophy, hypomyelinating, 22
★☆☆☆2021→ Residue 208
NM_005602.6(CLDN11):c.622T>G (p.Ter208Glu)Pathogenic
Leukodystrophy, hypomyelinating, 22
☆☆☆☆2021→ Residue 208
View on ClinVar ↗
Related Genes
TJP1Protein interaction98%OCLNProtein interaction96%TJP3Protein interaction87%PMP22Protein interaction86%CLDN3Protein interaction82%CLDN2Protein interaction81%
Tissue Expression6 tissues
Brain
100%
Ovary
96%
Heart
5%
Lung
4%
Liver
3%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
CLDN11TJP1OCLNTJP3PMP22CLDN3CLDN2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt O75508
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.35Highly Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.07 [0.03–0.35]
RankingsWhere CLDN11 stands among ~20K protein-coding genes
  • #8,295of 20,598
    Most Researched54
  • #4,422of 5,498
    Most Pathogenic Variants2
  • #1,529of 17,882
    Most Constrained (LOEUF)0.35 · top 10%
Genes detectedCLDN11
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Comprehensive analysis of metastatic gastric cancer tumour cells using single-cell RNA-seq.
PMID: 33441952
Sci Rep · 2021
1.00
2
Claudins and hepatocellular carcinoma.
PMID: 38185042
Biomed Pharmacother · 2024
0.90
3
RTN4/Nogo-A-S1PR2 negatively regulates angiogenesis and secondary neural repair through enhancing vascular autophagy in the thalamus after cerebral cortical infarction.
PMID: 35263212
Autophagy · 2022
0.80
4
Disrupting of IGF2BP3-stabilized CLDN11 mRNA by TNF-α increases intestinal permeability in obesity-related severe acute pancreatitis.
PMID: 39856555
Mol Med · 2025
0.70
5
Inactivation of the tight junction gene CLDN11 by aberrant hypermethylation modulates tubulins polymerization and promotes cell migration in nasopharyngeal carcinoma.
PMID: 29747653
J Exp Clin Cancer Res · 2018
0.60