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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CLDN23
claudin 23
Chromosome 8 · 8p23.1
NCBI Gene: 137075Ensembl: ENSG00000253958.2HGNC: HGNC:17591UniProt: Q96B33
22PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingbicellular tight junctionidentical protein bindingcalcium-independent cell-cell adhesion
✦AI Summary

CLDN23 (claudin-23) is a tight junction protein that mediates calcium-independent cell-cell adhesion through obliteration of intercellular space 1. As a four-transmembrane claudin family member located on chromosome 8.1, CLDN23 plays a structural role in maintaining the intestinal epithelial barrier 2. Mechanistically, CLDN23 expression is regulated by the microbial metabolite n-butyrate via SP1 and AMPK signaling pathways, which enhances intestinal barrier integrity 2. The gene is transcriptionally suppressed in colorectal cancer through an ELF4/ITGB8-AS1/EZH2-mediated histone H3K27me3 modification pathway that promotes cancer cell proliferation and invasion 3. CLDN23 is frequently downregulated in intestinal-type gastric cancer, implicating it as a candidate tumor suppressor gene 14. Beyond gastric malignancy, reduced CLDN23 expression is associated with colorectal cancer progression and poorer prognosis 56. Additionally, CLDN23 shows altered DNA methylation in childhood allergy disorders, suggesting involvement in barrier-related immune dysfunction 7, and genetic variants in CLDN23 are linked to irritable bowel syndrome susceptibility with pleiotropic effects on cardiovascular traits 8. These findings identify CLDN23 as both a critical intestinal barrier component and a tumor suppressor gene with potential as a prognostic biomarker and therapeutic target.

Sources cited
1
CLDN23 is a four-transmembrane claudin protein frequently downregulated in intestinal-type gastric cancer and localized to chromosome 8p23.1
PMID: 12736707
2
n-Butyrate upregulates CLDN23 expression through SP1 and AMPK pathways, regulating intestinal tight junction barrier function
PMID: 37467886
3
CLDN23 is downregulated in colorectal cancer through ELF4-mediated activation of ITGB8-AS1, which recruits EZH2 to catalyze H3K27me3 modification on CLDN23 promoter
PMID: 39325021
4
CLDN23 downregulation is implicated in epithelial-mesenchymal transition in gastric cancer
PMID: 16273224
5
CLDN23 is part of a five-gene prognostic signature for colorectal cancer patient outcomes
PMID: 33045967
6
CLDN23 is included in a seven-gene prognostic signature associated with colon cancer prognosis
PMID: 31612869
7
CLDN23 shows differential DNA methylation associated with childhood allergy disorders including asthma, rhinitis, and eczema
PMID: 33338541
8
CLDN23 is identified as a candidate gene implicated in intestinal barrier function in irritable bowel syndrome with genetic correlations to cardiovascular traits
PMID: 38643935
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CLDN19Protein interaction100%TJP1Protein interaction98%MFHAS1Protein interaction97%PPP1R3BProtein interaction97%OCLNProtein interaction96%CLDN20Protein interaction92%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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CLDN23CLDN19TJP1MFHAS1PPP1R3BOCLNCLDN20
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q96B33
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.96LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.99 [0.94–1.96]
RankingsWhere CLDN23 stands among ~20K protein-coding genes
  • #13,626of 20,598
    Most Researched22
  • #17,744of 17,882
    Most Constrained (LOEUF)1.96
Genes detectedCLDN23
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
CLDN23 gene, frequently down-regulated in intestinal-type gastric cancer, is a novel member of CLAUDIN gene family.
PMID: 12736707
Int J Mol Med · 2003
1.00
2
Rome III Criteria Capture Higher Irritable Bowel Syndrome SNP-Heritability and Highlight a Novel Genetic Link With Cardiovascular Traits.
PMID: 38643935
Cell Mol Gastroenterol Hepatol · 2024
0.90
3
A Five-gene Signature for Predicting the Prognosis of Colorectal Cancer.
PMID: 33045967
Curr Gene Ther · 2021
0.80
4
E74-like factor 4 promotes the proliferation, invasion, and migration of colorectal cancer cells via long non-coding RNA integrin subunit beta 8 antisense RNA 1-mediated histone H3 lysine 27 trimethylation modification.
PMID: 39325021
Asia Pac J Clin Oncol · 2024
0.70
5
Epithelial-mesenchymal transition in gastric cancer (Review).
PMID: 16273224
Int J Oncol · 2005
0.60