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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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CLEC4D
C-type lectin domain family 4 member D
Chromosome 12 · 12p13.31
NCBI Gene: 338339Ensembl: ENSG00000166527.9HGNC: HGNC:14554UniProt: Q8WXI8
16PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingD-mannose bindingpattern recognition receptor activityantifungal innate immune responsecolitisneoplasmsystemic lupus erythematosusgastric cancer
✦AI Summary

CLEC4D is a calcium-dependent C-type lectin that functions as a pattern recognition receptor in the innate immune system, recognizing pathogen-associated molecular patterns from bacteria and fungi 12. The protein forms functional complexes with signaling adapter FCER1G, likely through CLEC4E, leading to ITAM phosphorylation and activation of SYK, CARD9, and NF-κB pathways that promote antigen-presenting cell maturation and T-helper cell differentiation 12. CLEC4D can heterodimerize with CLEC6A for enhanced antifungal activity and functions as an endocytic receptor for antigen uptake and processing 23. The gene shows disease relevance across multiple conditions. In cardiovascular disease, CLEC4D expression is upregulated in intermediate monocytes from acute myocardial infarction patients without plaque rupture and serves as a diagnostic biomarker for coronary artery disease progression in type 1 diabetes 45. CLEC4D is also elevated in obese Prader-Willi syndrome patients and correlates with BMI, suggesting involvement in obesity-related inflammation 6. Additionally, it represents a potential therapeutic target in tuberculosis, cardiac remodeling, lung cancer, and shows differential expression in Ebola survivors with optic neuropathy 78910.

Sources cited
1
CLEC4D acts as pattern recognition receptor recognizing bacterial and fungal PAMPs, activating immune signaling pathways
PMID: 23602766
2
CLEC4D forms complexes with FCER1G and can heterodimerize with CLEC6A for antifungal activity
PMID: 23911656
3
CLEC4D functions as an endocytic receptor for antigen uptake and processing
PMID: 14971047
4
CLEC4D is upregulated in intermediate monocytes from AMI patients without plaque rupture
PMID: 35844519
5
CLEC4D serves as diagnostic biomarker for coronary artery disease progression in type 1 diabetes
PMID: 37075605
6
CLEC4D is upregulated in obese Prader-Willi syndrome patients and correlates with BMI
PMID: 40105403
7
CLEC4D represents potential therapeutic target in tuberculosis
PMID: 40618704
8
CLEC4D is involved in pathological cardiac remodeling
PMID: 36182775
9
CLEC4D may serve as potential drug target for lung cancer treatment
PMID: 37745724
10
CLEC4D shows differential expression in Ebola survivors with optic neuropathy
PMID: 40301432
Disease Associationsⓘ20
colitisOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.08Suggestive
systemic lupus erythematosusOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
isolated agammaglobulinemiaOpen Targets
0.08Suggestive
experimental autoimmune encephalomyelitisOpen Targets
0.07Suggestive
combined immunodeficiency due to CTPS1 deficiencyOpen Targets
0.07Suggestive
activated PI3K-delta syndromeOpen Targets
0.07Suggestive
common variable immunodeficiencyOpen Targets
0.06Suggestive
T-B+ severe combined immunodeficiency due to JAK3 deficiencyOpen Targets
0.06Suggestive
severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positiveOpen Targets
0.06Suggestive
immunodeficiency 62Open Targets
0.06Suggestive
immunodeficiency 18Open Targets
0.06Suggestive
hyper-IgE recurrent infection syndrome 5, autosomal recessiveOpen Targets
0.06Suggestive
immunodeficiency, common variable, 3Open Targets
0.06Suggestive
immunodeficiency 112Open Targets
0.06Suggestive
Chronic mucocutaneous candidosisOpen Targets
0.06Suggestive
gamma chain deficiencyOpen Targets
0.06Suggestive
agammaglobulinemia 8, autosomal dominantOpen Targets
0.06Suggestive
immunodeficiency, common variable, 4Open Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SYKProtein interaction100%FCER1GProtein interaction99%CLEC4EProtein interaction99%CARD9Protein interaction99%CLEC7AProtein interaction99%CLEC9AProtein interaction72%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
17%
Brain
1%
Liver
1%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
CLEC4DSYKFCER1GCLEC4ECARD9CLEC7ACLEC9A
PROTEIN STRUCTURE
Preparing viewer…
PDB3WHD · 2.29 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.61LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.01 [0.65–1.61]
RankingsWhere CLEC4D stands among ~20K protein-coding genes
  • #15,229of 20,598
    Most Researched16
  • #15,732of 17,882
    Most Constrained (LOEUF)1.61
Genes detectedCLEC4D
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Single-Cell RNA Sequencing of Peripheral Blood Mononuclear Cells From Acute Myocardial Infarction.
PMID: 35844519
Front Immunol · 2022
1.00
2
Prader-Willi syndrome gene expression profiling of obese and non-obese patients reveals transcriptional changes in CLEC4D and ANXA3.
PMID: 40105403
J Pediatr Endocrinol Metab · 2025
0.90
3
Identification and validation of diagnostic biomarkers of coronary artery disease progression in type 1 diabetes via integrated computational and bioinformatics strategies.
PMID: 37075605
Comput Biol Med · 2023
0.80
4
Fucosylated haptoglobin promotes inflammation via Mincle in sepsis: an observational study.
PMID: 39904983
Nat Commun · 2025
0.70
5
Identification of monocyte-associated genes MSRB2, CLEC4D, and ASGR2 as potential biomarkers for tuberculosis via machine learning and mendelian randomization.
PMID: 40618704
Tuberculosis (Edinb) · 2025
0.60