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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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DPEP3
dipeptidase 3
Chromosome 16 · 16q22.1
NCBI Gene: 64180Ensembl: ENSG00000141096.7HGNC: HGNC:23029UniProt: A0A140VK16
17PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
dipeptidase activityplasma membraneacrosomal vesiclemembraneneurodegenerative diseasealcohol drinkinglysosomal storage diseaseazoospermia
✦AI Summary

DPEP3 (dipeptidase 3) is a glycosylphosphatidylinstitial-anchored membrane protein normally expressed in testis 1 that lacks enzymatic dipeptidase activity, distinguishing it from related DPEP1/2 enzymes 1. Structural analysis reveals DPEP3 contains critical amino acid substitutions: asparagine at position 359 (instead of aspartate in active enzymes) prevents activation of the catalytic water/hydroxide, while tyrosine at position 269 (versus histidine) reduces β-zinc affinity and causes substrate steric hindrance 1. Consequently, DPEP3 cannot hydrolyze typical dipeptidase substrates including cystinyl-bis-glycine, leukotriene D4, or the β-lactam antibiotic imipenem 1. Biologically, DPEP3 functions as a testis-specific cell-surface protein that forms a complex with TEX101, a cell-surface chaperone regulating spermatozoa maturation 2. However, DPEP3 knockout mice remain fertile despite reduced sperm counts, indicating it is non-essential for male fertility 3. Clinically, DPEP3 expression is upregulated in platinum-resistant ovarian cancer and serves as a target for antibody-drug conjugates in cancer immunotherapy 45. DPEP3 is also expressed in non-small cell lung cancer as a cancer-testis antigen 6. These findings suggest DPEP3 functions primarily as a structural or regulatory protein rather than a catalytic enzyme.

Sources cited
1
DPEP3 structure, lack of dipeptidase activity, and key amino acid substitutions (asparagine 359, tyrosine 269) preventing catalytic function
PMID: 32325220
2
DPEP3 forms a testis-specific complex with TEX101 and is a cell-surface protein
PMID: 30097533
3
DPEP3 is testis-specific and not essential for male fertility in mice
PMID: 31212048
4
DPEP3 is a target for antibody-drug conjugates in platinum-resistant ovarian cancer treatment
PMID: 39922351
5
DPEP3 is an antigen target for ADCs in platinum-resistant ovarian cancer
PMID: 39367438
6
DPEP3 is expressed as a cancer-testis antigen in non-small cell lung cancer
PMID: 37341056
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.35Weak
alcohol drinkingOpen Targets
0.16Weak
lysosomal storage diseaseOpen Targets
0.15Weak
azoospermiaOpen Targets
0.09Suggestive
spermatogenic failure 8Open Targets
0.07Suggestive
partial chromosome Y deletionOpen Targets
0.07Suggestive
spermatogenic failure 1Open Targets
0.07Suggestive
Abnormality of refractionOpen Targets
0.06Suggestive
spermatogenic failure 22Open Targets
0.06Suggestive
spermatogenic failure 48Open Targets
0.06Suggestive
spermatogenic failure 51Open Targets
0.06Suggestive
spermatogenic failure 54Open Targets
0.06Suggestive
spermatogenic failure 40Open Targets
0.06Suggestive
spermatogenic failure, X-linked, 3Open Targets
0.06Suggestive
spermatogenic failure 76Open Targets
0.06Suggestive
spermatogenic failure 80Open Targets
0.06Suggestive
spermatogenic failure 47Open Targets
0.06Suggestive
spermatogenic failure 70Open Targets
0.06Suggestive
spermatogenic failure 79Open Targets
0.06Suggestive
spermatogenic failure 39Open Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PGA4Shared pathway100%PGA3Shared pathway100%CAPN14Shared pathway100%CTRB2Shared pathway100%CAPN8Shared pathway100%PRSS48Shared pathway100%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
16%
Brain
9%
Heart
7%
Liver
4%
Ovary
1%
Gene Interaction Network
Click a node to explore
DPEP3PGA4PGA3CAPN14CTRB2CAPN8PRSS48
PROTEIN STRUCTURE
Preparing viewer…
PDB6VGO · 1.82 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.10LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.85 [0.66–1.10]
RankingsWhere DPEP3 stands among ~20K protein-coding genes
  • #14,982of 20,598
    Most Researched17
  • #11,187of 17,882
    Most Constrained (LOEUF)1.10
Genes detectedDPEP3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A mini-overview of antibody-drug conjugates in platinum-resistant ovarian cancer: A preclinical and clinical perspective.
PMID: 39922351
Int J Biol Macromol · 2025
1.00
2
Discovery of a Human Testis-specific Protein Complex TEX101-DPEP3 and Selection of Its Disrupting Antibodies.
PMID: 30097533
Mol Cell Proteomics · 2018
0.90
3
ADC: a deadly killer of platinum resistant ovarian cancer.
PMID: 39367438
J Ovarian Res · 2024
0.80
4
Effects of varicocele and microsurgical varicocelectomy on the metabolites in semen.
PMID: 35338186
Sci Rep · 2022
0.70
5
Expression of cancer-testis antigens in the immune microenvironment of non-small cell lung cancer.
PMID: 37341056
Mol Oncol · 2023
0.60