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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ECM2
extracellular matrix protein 2
Chromosome 9 · 9q22.31
NCBI Gene: 1842Ensembl: ENSG00000106823.14HGNC: HGNC:3154UniProt: O94769
13PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
extracellular matrixpositive regulation of cell-substrate adhesionheparin bindingextracellular matrix organizationAbnormality of the skeletal systemjaw diseasegliomaobstructive sleep apnea
✦AI Summary

ECM2 (extracellular matrix protein 2) is a secreted glycoprotein that plays crucial roles in extracellular matrix organization and cell adhesion processes. The protein contains functional domains including an RGD sequence, von Willebrand factor domain, and leucine-rich repeats that facilitate protein-protein interactions and cell-ECM recognition 1. ECM2 demonstrates calcium-binding properties and preferentially binds to B lineage cells in a divalent cation-dependent manner, promoting lymphopoiesis by enhancing mitogen-dependent proliferation of mature B cells and pre-B cell cloning 2. The protein is predominantly expressed in adipose tissue and female-specific organs including mammary gland, ovary, and uterus 1. In disease contexts, ECM2 serves as a biomarker across multiple conditions: it is upregulated in pulmonary artery hypertension and correlates with immune cell infiltration patterns 3, acts as a prognostic indicator in lower grade glioma where high expression predicts shorter survival 4, and functions in triple-negative breast cancer suppression through ECM remodeling under HOXB2 transcriptional control 5. Additionally, ECM2 has emerged as a diagnostic biomarker for coronary artery disease, contributing to biomarker panels that can distinguish stable CAD from controls 6.

Sources cited
1
ECM2 contains RGD sequence, von Willebrand factor domain, and leucine-rich repeats; expressed predominantly in adipose tissue and female-specific organs
PMID: 9790758
2
ECM2 is a calcium-binding secreted protein that binds B lineage cells and promotes lymphopoiesis
PMID: 10036996
3
ECM2 is upregulated in pulmonary artery hypertension and correlates with immune cell infiltration
PMID: 34012575
4
High ECM2 expression predicts shorter survival in lower grade glioma patients
PMID: 36997057
5
ECM2 is regulated by HOXB2 and involved in ECM organization in triple-negative breast cancer
PMID: 38322121
6
ECM2 serves as a diagnostic biomarker for coronary artery disease
PMID: 41126379
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.45Moderate
jaw diseaseOpen Targets
0.27Weak
gliomaOpen Targets
0.07Suggestive
obstructive sleep apneaOpen Targets
0.06Suggestive
ovarian carcinomaOpen Targets
0.04Suggestive
skin diseaseOpen Targets
0.03Suggestive
ependymomaOpen Targets
0.03Suggestive
breast cancerOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.03Suggestive
pulmonary arterial hypertensionOpen Targets
0.03Suggestive
mononeuropathyOpen Targets
0.03Suggestive
frozen shoulderOpen Targets
0.02Suggestive
triple-negative breast cancerOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
central nervous system cancerOpen Targets
0.02Suggestive
non-small cell lung carcinomaOpen Targets
0.01Suggestive
glioblastoma multiformeOpen Targets
0.01Suggestive
breast carcinomaOpen Targets
0.01Suggestive
major depressive disorderOpen Targets
0.01Suggestive
leiomyomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SNW1Protein interaction100%BUD31Protein interaction100%CDC5LProtein interaction100%CWC15Protein interaction100%PLRG1Protein interaction100%OMDProtein interaction70%
Tissue Expression6 tissues
Ovary
100%
Heart
89%
Liver
49%
Lung
17%
Brain
8%
Bone Marrow
3%
Gene Interaction Network
Click a node to explore
ECM2SNW1BUD31CDC5LCWC15PLRG1OMD
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt O94769
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.00LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.79 [0.62–1.00]
RankingsWhere ECM2 stands among ~20K protein-coding genes
  • #16,151of 20,598
    Most Researched13
  • #9,721of 17,882
    Most Constrained (LOEUF)1.00
Genes detectedECM2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
PMID: 34012575
J Thorac Dis · 2021
1.00
2
Lymphopoiesis and matrix glycoprotein SC1/ECM2.
PMID: 10036996
Leuk Lymphoma · 1998
0.90
3
ECM2, a prognostic biomarker for lower grade glioma, serves as a potential novel target for immunotherapy.
PMID: 36997057
Int J Biochem Cell Biol · 2023
0.80
4
The homeoprotein HOXB2 limits triple-negative breast carcinogenesis via extracellular matrix remodeling.
PMID: 38322121
Int J Biol Sci · 2024
0.70
5
Proteomic and histopathologic profiling reveal molecular features and clinical biomarkers of coronary atherosclerosis.
PMID: 41126379
Biomark Res · 2025
0.60