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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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OMD
osteomodulin
Chromosome 9 · 9q22.31
NCBI Gene: 4958Ensembl: ENSG00000127083.9HGNC: HGNC:8134UniProt: Q99983
20PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
extracellular exosomeGO:0005615gel phase of interstitial matrixextracellular region
✦AI Summary

Based on the provided abstracts, osteomodulin (OMD) appears to function primarily in biomineralization processes and osteogenic differentiation. OMD is upregulated in human renal interstitial fibroblasts within Randall's plaques (calcium deposits in renal papillae) and colocalizes with calcium phosphate crystals and calcium vesicles 1. The protein enhances osteogenic-like differentiation of renal interstitial fibroblasts both in vitro and in vivo through a positive feedback loop involving OMD/BMP2/BMPR1A/RUNX2/OMD signaling 1. Mechanistically, OMD induces an osteogenic-like microenvironment in the renal interstitium that contributes to Randall's plaque formation, which serves as niduses for calcium oxalate kidney stones 1. Crystal deposits are significantly reduced in mice with Omd deletion in renal interstitial fibroblasts following nephrocalcinosis induction, demonstrating its functional importance in pathological mineralization 1. While the UniProt annotation suggests a role in osteoblast binding via αVβ3-integrin, this specific function was not supported by the provided abstracts. The available evidence indicates OMD plays a crucial role in pathological biomineralization processes, particularly in kidney stone formation.

Sources cited
1
OMD is upregulated in renal interstitial fibroblasts within Randall's plaques and colocalizes with calcium phosphate crystals
PMID: 39225583
2
OMD enhances osteogenic-like differentiation through OMD/BMP2/BMPR1A/RUNX2/OMD signaling pathway
PMID: 39225583
3
OMD contributes to Randall's plaque formation and crystal deposits are reduced in Omd deletion mice
PMID: 39225583
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
OGNProtein interaction86%ASPNProtein interaction84%PRELPProtein interaction77%ACANProtein interaction74%FMODProtein interaction74%LUMProtein interaction74%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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OMDOGNASPNPRELPACANFMODLUM
PROTEIN STRUCTURE
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PDB5YQ5 · 2.17 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.76LoF Tolerant
pLIⓘ
0.03Tolerant
Observed/Expected LoF0.48 [0.32–0.76]
RankingsWhere OMD stands among ~20K protein-coding genes
  • #14,212of 20,598
    Most Researched20
  • #6,048of 17,882
    Most Constrained (LOEUF)0.76
Genes detectedOMD
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Oral dysfunction as a cause of malocclusion.
PMID: 31074141
Orthod Craniofac Res · 2019
1.00
2
Defining oligometastatic disease from a radiation oncology perspective: An ESTRO-ASTRO consensus document.
PMID: 32388150
Radiother Oncol · 2020
0.90
3
Crosstalk between the oral microbiota, mucosal immunity, and the epithelial barrier regulates oral mucosal disease pathogenesis.
PMID: 34040155
Mucosal Immunol · 2021
0.80
4
European clinical practice guidelines for the definition, diagnosis, and treatment of oligometastatic esophagogastric cancer (OMEC-4).
PMID: 38678762
Eur J Cancer · 2024
0.70
5
Occult macular dystrophy.
PMID: 25665791
Jpn J Ophthalmol · 2015
0.60