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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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EID3
EP300 interacting inhibitor of differentiation 3
Chromosome 12 · 12q23.3
NCBI Gene: 493861Ensembl: ENSG00000255150.2HGNC: HGNC:32961UniProt: A0A140VJI9
22PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
DNA RepairTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnucleoplasmSmc5-Smc6 complexnucleolusliver diseasecentral nervous system cancergliomaosteosarcoma
✦AI Summary

EID3 (EP300 interacting inhibitor of differentiation 3) functions as a transcriptional repressor that modulates cellular differentiation, DNA repair, and cancer progression through multiple mechanisms. EID3 acts as an inhibitor of CBP/p300-dependent transcription by directly binding to the SRC-1 interacting domain of CBP, blocking recruitment of coactivators to nuclear receptor-regulated promoters 1. The protein plays crucial roles in DNA damage response, with elevated EID3 levels following radiochemotherapy promoting gastric cancer stem cell biogenesis through interaction with NAMPT and activation of Wnt signaling 2. EID3 is essential for mammalian spermatogenesis, regulating meiosis and chr12 condensation during sperm development, with deficiency leading to impaired histone-to-protamine transition and abnormal sperm morphology 3. In cancer contexts, EID3 demonstrates oncogenic properties by promoting glioma cell proliferation and survival through AMPKα1 inactivation 4, and is highly expressed in colorectal cancer cells with low proteasome activity, contributing to treatment resistance 5. EID3 also regulates stem cell differentiation, directly associating with DNMT3A during transdifferentiation of mesenchymal stem cells to neural progenitor-like cells 6. These findings establish EID3 as a multifunctional protein critical for transcriptional regulation, DNA repair responses, and cellular differentiation processes.

Sources cited
1
EID3 acts as an inhibitor of CBP/p300-dependent transcription by directly binding to the SRC-1 interacting domain of CBP
PMID: 15987788
2
EID3 promotes gastric cancer stem cell biogenesis through interaction with NAMPT and Wnt signaling activation following radiochemotherapy
PMID: 36153608
3
EID3 is essential for spermatogenesis, regulating meiosis and chromatin condensation during sperm development
PMID: 39551708
4
EID3 promotes glioma cell proliferation and survival by inactivating AMPKα1
PMID: 36344477
5
EID3 is highly expressed in colorectal cancer cells with low proteasome activity and contributes to treatment resistance
PMID: 27166395
6
EID3 directly associates with DNMT3A during transdifferentiation of mesenchymal stem cells to neural progenitor-like cells
PMID: 28074931
Disease Associationsⓘ20
liver diseaseOpen Targets
0.11Weak
central nervous system cancerOpen Targets
0.11Weak
gliomaOpen Targets
0.08Suggestive
osteosarcomaOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.05Suggestive
gastric cancerOpen Targets
0.03Suggestive
nutritional deficiency diseaseOpen Targets
0.02Suggestive
osteoarthritisOpen Targets
0.02Suggestive
Dental malocclusionOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
colorectal cancerOpen Targets
0.02Suggestive
venous thromboembolismOpen Targets
0.02Suggestive
First degree atrioventricular blockOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
infectionOpen Targets
0.01Suggestive
breast cancerOpen Targets
0.01Suggestive
glioblastoma multiformeOpen Targets
0.01Suggestive
acute myeloid leukemiaOpen Targets
0.01Suggestive
pancreatic neuroendocrine tumorOpen Targets
0.01Suggestive
IGA glomerulonephritisOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
EID2Protein interaction100%SUMO4Protein interaction100%NSMCE4AProtein interaction94%NSMCE1Protein interaction94%SMC3Protein interaction88%NSMCE3Protein interaction86%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
37%
Brain
34%
Lung
23%
Liver
12%
Heart
12%
Gene Interaction Network
Click a node to explore
EID3EID2SUMO4NSMCE4ANSMCE1SMC3NSMCE3
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N140
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.91LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.31 [0.64–1.91]
RankingsWhere EID3 stands among ~20K protein-coding genes
  • #13,652of 20,598
    Most Researched22
  • #17,315of 17,882
    Most Constrained (LOEUF)1.91
Genes detectedEID3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Radiochemotherapy-induced DNA repair promotes the biogenesis of gastric cancer stem cells.
PMID: 36153608
Stem Cell Res Ther · 2022
1.00
2
EID3 inhibits the osteogenic differentiation of periodontal ligament stem cells and mediates the signal transduction of TAZ-EID3-AKT/MTOR/ERK.
PMID: 38216090
Biochim Biophys Acta Mol Cell Res · 2024
0.90
3
EP300-interacting inhibitor of differentiation 3 is required for spermatogenesis in mice.
PMID: 39551708
Andrology · 2025
0.80
4
EID3 Promotes Glioma Cell Proliferation and Survival by Inactivating AMPKα1.
PMID: 36344477
J Korean Neurosurg Soc · 2022
0.70
5
Uncover DNA damage and repair-related gene signature and risk score model for glioma.
PMID: 37086071
Ann Med · 2023
0.60