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8 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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NSMCE3
NSE3 component of SMC5/6 complex
Chromosome 15 Β· 15q13.1
NCBI Gene: 56160Ensembl: ENSG00000185115.6HGNC: HGNC:7677UniProt: Q96MG7
46PubMed Papers
1Diseases
0Drugs
2Pathogenic Variants
FUNCTIONAL ROLE
DNA Repair
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingprotein dimerization activityDNA repairpositive regulation of protein ubiquitinationLung disease, immunodeficiency, and chromosome breakage syndrome
✦AI Summary

NSMCE3 is a component of the SMC5/6 complex, a ring-structured protein assembly essential for DNA double-strand break repair via homologous recombination 12. The complex promotes sister chr15 homologous recombination and is required for telomere maintenance in alternative lengthening of telomeres (ALT) cells through sumoylation of shelterin complex components 1. NSMCE3 functions within a sub-complex with NSMCE1, which enhances ubiquitin ligase activity by recruiting E2 enzymes to E3-substrate complexes, though it can also facilitate ubiquitin-independent proteasomal degradation 13. Biallelic missense mutations in NSMCE3 cause lung disease, immunodeficiency, and chromosome 15 syndrome (LICS), an autosomal recessive disorder characterized by severe pulmonary disease in early childhood 2. Patient cells display chromosome 15, micronuclei, sensitivity to replication stress and DNA damage, and defective homologous recombination 2. These mutations destabilize the SMC5/6 complex, impairing its DNA damage response and chromosome 15 functions, leading to combined T and B cell immunodeficiency 2. NSMCE3 mutations have also been identified in EBV-associated smooth muscle tumors in immunodeficient patients 4, suggesting broader roles in immune surveillance and tumor suppression.

Sources cited
1
NSMCE3 component enhances ubiquitin ligase activity of NSMCE1 and facilitates recruitment of E2 enzymes; part of SMC5-6 complex involved in DNA double-strand break repair
PMID: 20864041
2
Biallelic missense mutations in NSMCE3 cause lung disease, immunodeficiency, and chromosome breakage syndrome with destabilization of SMC5/6 complex, chromosome rearrangements, and defective homologous recombination
PMID: 27427983
3
NSMCE1/3 subcomplex facilitates ubiquitin-independent proteasomal degradation and inhibits HBV transcription and proliferation
PMID: 41825673
4
NSMCE3 mutations identified in EBV-associated smooth muscle tumors in immunodeficient patients
PMID: 40955557
5
LICS patients with NSMCE3 mutations can have variable phenotypes with limited immunological abnormalities
PMID: 33741030
Disease Associationsβ“˜1
Lung disease, immunodeficiency, and chromosome breakage syndromeUniProt
Pathogenic Variants2
NM_138704.4(NSMCE3):c.790C>T (p.Leu264Phe)Pathogenic
Lung damage, immunodeficiency and chromosome breakage syndrome|Lung disease, immunodeficiency, and chromosome breakage syndrome;|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 264
NM_138704.4(NSMCE3):c.626C>T (p.Pro209Leu)Pathogenic
Lung damage, immunodeficiency and chromosome breakage syndrome|Lung disease, immunodeficiency, and chromosome breakage syndrome;
β˜…β˜†β˜†β˜†2016β†’ Residue 209
View on ClinVar β†—
Related Genes
RAD21Protein interaction100%SUMO4Protein interaction96%PJA1Protein interaction87%EID3Protein interaction86%ZNF597Protein interaction84%CSAG1Protein interaction82%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
NSMCE3RAD21SUMO4PJA1EID3ZNF597CSAG1
PROTEIN STRUCTURE
Preparing viewer…
PDB5HVQ Β· 2.92 Γ… Β· X-ray
View on RCSB β†—
RankingsWhere NSMCE3 stands among ~20K protein-coding genes
  • #9,355of 20,598
    Most Researched46
  • #4,452of 5,498
    Most Pathogenic Variants2
Genes detectedNSMCE3
Sources retrieved8 papers
Response timeβ€”
πŸ“„ Sources
8β–Ό
1
Mechanism insights into the role of Smc5/6 in HBV inhibition.
PMID: 41825673
Int J Biol Macromol Β· 2026
1.00
2
Destabilized SMC5/6 complex leads to chromosome breakage syndrome with severe lung disease.
PMID: 27427983
J Clin Invest Β· 2016
0.88
3
EBV-associated smooth muscle tumour: a clinicopathological and genetic study of nine cases revealing heterogeneous immune statuses and novel pathogenic mutations.
PMID: 40955557
Histopathology Β· 2025
0.75
4
A necdin/MAGE-like gene in the chromosome 15 autism susceptibility region: expression, imprinting, and mapping of the human and mouse orthologues.
PMID: 11782285
BMC Genet Β· 2001
0.63
5
Analysis of the Nse3/MAGE-binding domain of the Nse4/EID family proteins.
PMID: 22536443
PLoS One Β· 2012
0.50