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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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ELAC2
elaC ribonuclease Z 2
Chromosome 17 Β· 17p12
NCBI Gene: 60528Ensembl: ENSG00000006744.20HGNC: HGNC:14198UniProt: A0A0S2Z5M8
126PubMed Papers
22Diseases
0Drugs
82Pathogenic Variants
FUNCTIONAL ROLE
Oncogene
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
RNA bindingtRNA 3'-end processingmitochondrial tRNA 3'-end processingmitochondrioncombined oxidative phosphorylation defect type 17prostate cancer, hereditary, 2genetic disorderIntellectual disability
✦AI Summary

ELAC2 (elaC ribonuclease Z 2) is a zinc phosphodiesterase that functions as a mitochondrial tRNase Z, catalyzing 3' end processing of both mitochondrial and nuclear precursor tRNAs 1. In mitochondria, ELAC2 removes 3' trailer sequences from pre-tRNAs as part of multi-step tRNA maturation 2, while associating with mitochondrial nucleoids to coordinate RNA processing and ribosome assembly [UniProt annotation]. ELAC2 operates independently for nuclear pre-tRNA processing but requires accessory proteins TRMT10C and SDR5C1 to process structurally divergent mitochondrial tRNAs lacking canonical features 3. Beyond tRNA processing, ELAC2 participates in degradation of mitochondria-encoded circular RNAs (mecciRNAs) through a complex with SUPV3L1, regulating mitochondrial reactive oxygen species release and permeability transition pore function 4. Clinically, ELAC2 mutations cause combined oxidative phosphorylation deficiency 17, with cardiomyopathy-linked variants demonstrating cardiac hypertrophy and reduced contractility in experimental models 5. ELAC2 polymorphisms, particularly Ser217Leu and Ala541Thr variants, constitute low-penetrance susceptibility markers for hereditary and sporadic prostate cancer 67, with certain polymorphisms associated with elevated PSA levels and tumor staging in affected populations 8.

Sources cited
1
ELAC2 functions as tRNase Z in human mitochondria, removing 3' trailer sequences from pre-tRNAs
PMID: 21593607
2
ELAC2 catalyzes 3' trailer processing as part of mitochondrial pre-tRNA maturation
PMID: 39938738
3
ELAC2 processes both nuclear and mitochondrial tRNAs, with differential cofactor requirements based on tRNA structure
PMID: 39747487
4
ELAC2 forms a degradation complex with SUPV3L1 that processes mecciRNAs and regulates mitochondrial permeability transition pore
PMID: 39973625
5
ELAC2 mutations cause infantile cardiomyopathy with cardiac hypertrophy and contractility deficits
PMID: 34338278
6
ELAC2 Ser217Leu and Ala541Thr polymorphisms are associated with increased prostate cancer risk
PMID: 20231859
7
ELAC2 Ser217Leu variant represents a susceptibility marker for hereditary and sporadic prostate cancer
PMID: 31321101
8
ELAC2 polymorphisms associate with prostate cancer clinical parameters including PSA levels and tumor staging
PMID: 27318894
Disease Associationsβ“˜22
combined oxidative phosphorylation defect type 17Open Targets
0.81Strong
prostate cancer, hereditary, 2Open Targets
0.73Strong
genetic disorderOpen Targets
0.50Moderate
Intellectual disabilityOpen Targets
0.43Moderate
mitochondrial diseaseOpen Targets
0.37Weak
mitochondrial complex I deficiency, nuclear type 1Open Targets
0.37Weak
ovarian cancerOpen Targets
0.34Weak
viral pneumoniaOpen Targets
0.30Weak
lobe attachmentOpen Targets
0.22Weak
alcohol drinkingOpen Targets
0.22Weak
cellulitisOpen Targets
0.19Weak
placenta praeviaOpen Targets
0.18Weak
Abruptio PlacentaeOpen Targets
0.18Weak
microcephalyOpen Targets
0.11Weak
prostate cancerOpen Targets
0.09Suggestive
Familial prostate cancerOpen Targets
0.08Suggestive
benign prostatic hyperplasiaOpen Targets
0.06Suggestive
prostate cancer, hereditaryOpen Targets
0.06Suggestive
prostate carcinomaOpen Targets
0.06Suggestive
prostate adenocarcinomaOpen Targets
0.06Suggestive
Combined oxidative phosphorylation deficiency 17UniProt
Prostate cancer, hereditary, 2UniProt
Pathogenic Variants82
NM_018127.7(ELAC2):c.297-2_297-1delinsTPathogenic
Combined oxidative phosphorylation defect type 17|not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2026
NM_018127.7(ELAC2):c.1489C>T (p.Arg497Ter)Pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜…β˜†β˜†2026β†’ Residue 497
NM_018127.7(ELAC2):c.2009del (p.Cys670fs)Pathogenic
Combined oxidative phosphorylation defect type 17|Inborn genetic diseases|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 670
NM_018127.7(ELAC2):c.1444G>T (p.Glu482Ter)Pathogenic
not provided|Combined oxidative phosphorylation defect type 17|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 482
NM_018127.7(ELAC2):c.88G>T (p.Glu30Ter)Pathogenic
Combined oxidative phosphorylation defect type 17|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 30
NM_018127.7(ELAC2):c.1275C>A (p.Tyr425Ter)Pathogenic
not provided|Combined oxidative phosphorylation defect type 17
β˜…β˜…β˜†β˜†2025β†’ Residue 425
NM_018127.7(ELAC2):c.245+2T>APathogenic
Combined oxidative phosphorylation defect type 17|not provided
β˜…β˜…β˜†β˜†2025
NM_018127.7(ELAC2):c.460T>C (p.Phe154Leu)Pathogenic
Combined oxidative phosphorylation defect type 17|Prostate cancer, hereditary, 2, susceptibility to
β˜…β˜…β˜†β˜†2025β†’ Residue 154
NM_018127.7(ELAC2):c.1423+1G>APathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜…β˜†β˜†2024
NM_018127.7(ELAC2):c.225C>A (p.Tyr75Ter)Pathogenic
Combined oxidative phosphorylation defect type 17;Prostate cancer, hereditary, 2|Combined oxidative phosphorylation defect type 17
β˜…β˜…β˜†β˜†2024β†’ Residue 75
NM_018127.7(ELAC2):c.2144del (p.Met715fs)Pathogenic
Combined oxidative phosphorylation defect type 17|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 715
NM_018127.7(ELAC2):c.1908+1G>ALikely pathogenic
Combined oxidative phosphorylation defect type 17|Prostate cancer, hereditary, 2
β˜…β˜…β˜†β˜†2024
NM_018127.7(ELAC2):c.52C>T (p.Gln18Ter)Pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜…β˜†β˜†2024β†’ Residue 18
NM_018127.7(ELAC2):c.457del (p.Ile153fs)Pathogenic
Combined oxidative phosphorylation defect type 17|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 153
NM_018127.7(ELAC2):c.139G>T (p.Gly47Ter)Pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜†β˜†β˜†2026β†’ Residue 47
NM_018127.7(ELAC2):c.246-2A>GLikely pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜†β˜†β˜†2026
NM_018127.7(ELAC2):c.766del (p.Val256fs)Pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜†β˜†β˜†2025β†’ Residue 256
NM_018127.7(ELAC2):c.1809-1G>ALikely pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜†β˜†β˜†2025
NM_018127.7(ELAC2):c.933T>A (p.Cys311Ter)Pathogenic
Combined oxidative phosphorylation defect type 17
β˜…β˜†β˜†β˜†2025β†’ Residue 311
NM_018127.7(ELAC2):c.1305-2A>GLikely pathogenic
Combined oxidative phosphorylation defect type 17|Melanoma
β˜…β˜†β˜†β˜†2025
View on ClinVar β†—
Related Genes
SUPV3L1Protein interaction86%EXOGProtein interaction86%PRORPProtein interaction85%ENDOGProtein interaction85%DCLRE1AProtein interaction79%CPSF3Protein interaction79%
Tissue Expression6 tissues
Heart
100%
Liver
97%
Bone Marrow
66%
Lung
64%
Ovary
58%
Brain
51%
Gene Interaction Network
Click a node to explore
ELAC2SUPV3L1EXOGPRORPENDOGDCLRE1ACPSF3
PROTEIN STRUCTURE
Preparing viewer…
PDB9EY0 Β· 2.78 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.02LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.86 [0.72–1.02]
RankingsWhere ELAC2 stands among ~20K protein-coding genes
  • #3,719of 20,598
    Most Researched126 Β· top quartile
  • #907of 5,498
    Most Pathogenic Variants82 Β· top quartile
  • #10,002of 17,882
    Most Constrained (LOEUF)1.02
Genes detectedELAC2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Advances in Human Pre-tRNA Maturation: TRMT10C and ELAC2 in Focus.
PMID: 39938738
J Mol Biol Β· 2025
1.00
2
Fast Degradation of MecciRNAs by SUPV3L1/ELAC2 Provides a Novel Opportunity to Tackle Heart Failure With Exogenous MecciRNA.
PMID: 39973625
Circulation Β· 2025
0.90
3
ELAC2 polymorphisms and prostate cancer risk: a meta-analysis based on 18 case-control studies.
PMID: 20231859
Prostate Cancer Prostatic Dis Β· 2010
0.80
4
Involvement of human ELAC2 gene product in 3' end processing of mitochondrial tRNAs.
PMID: 21593607
RNA Biol Β· 2011
0.70
5
Association between RNASEL, MSR1, and ELAC2 single nucleotide polymorphisms and gene expression in prostate cancer risk.
PMID: 27318894
Urol Oncol Β· 2016
0.60