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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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EXOG
exo/endonuclease G
Chromosome 3 · 3p22.2
NCBI Gene: 9941Ensembl: ENSG00000157036.14HGNC: HGNC:3347UniProt: Q9Y2C4
38PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
mitochondrial inner membraneprotein-containing complexprotein binding5'-3' exonuclease activitysebaceous gland diseaseEpidermal Inclusion CystAbnormality of the skeletal systemdisorder of pilosebaceous unit
✦AI Summary

EXOG is a mitochondrial endo/exonuclease that functions as a critical enzyme for maintaining mitochondrial DNA (mtDNA) integrity through multiple DNA processing pathways. Primary function: EXOG exhibits 5'-3' exonuclease activity with preference for single-stranded DNA and possesses a Wing domain that suppresses endonuclease activity while conferring precise dinucleotide excision capability 1. Mechanism: EXOG processes DNA intermediates through three major pathways: (1) removal of single-stranded DNA flaps generated during base excision repair 2, (2) processing of RNA primers during mtDNA replication, including cleavage at RNA-DNA junctions and cooperation with RNase H1 34, and (3) removal of deoxyribose phosphate (dRP) lesions and abasic sites during base excision repair 5. EXOG's Wing domain enables substrate specificity distinct from its paralog EndoG, which differentiated during metazoan evolution 6. Disease relevance: EXOG participates in mtDNA depletion responses to herpes simplex virus infection through redundant mechanisms with ENDOG 7. Clinical significance: EXOG's multifunctional role in mtDNA maintenance positions it as important for conditions involving mitochondrial dysfunction, though direct clinical associations require further investigation.

Sources cited
1
EXOG cleaves DNA flaps including single-stranded DNA flaps in free and SSB-protected forms through its Wing domain
PMID: 40042814
2
EXOG plays a fundamental role in RNA primer removal during mtDNA replication, cleaving RNA-containing flaps and cooperating with RNase H1
PMID: 35819194
3
EXOG exhibits strong 5'-dRP removal ability and functions on multiple abasic site substrates in base excision repair
PMID: 36516439
4
EXOG efficiently cleaves at RNA-DNA junctions to remove residual ribonucleotides during mtDNA replication
PMID: 30949702
5
EXOG is a paralog of EndoG that arose through gene duplication in higher eukaryotes and displays 5'-3' exonuclease activity
PMID: 18187503
6
EXOG's Wing domain suppresses endonuclease activity and confers 5'-dsDNA exonuclease activity with precise dinucleotide excision
PMID: 28466855
7
EXOG participates redundantly with ENDOG in mtDNA depletion initiated by herpes simplex virus 1
PMID: 23986585
Disease Associationsⓘ20
sebaceous gland diseaseOpen Targets
0.44Moderate
Epidermal Inclusion CystOpen Targets
0.43Moderate
Abnormality of the skeletal systemOpen Targets
0.39Weak
disorder of pilosebaceous unitOpen Targets
0.36Weak
alcohol drinkingOpen Targets
0.32Weak
Brugada syndromeOpen Targets
0.19Weak
bone fractureOpen Targets
0.16Weak
hepatitis B virus infectionOpen Targets
0.12Weak
atrial fibrillationOpen Targets
0.05Suggestive
cardiac arrhythmiaOpen Targets
0.05Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.04Suggestive
First degree atrioventricular blockOpen Targets
0.03Suggestive
Paroxysmal supraventricular tachycardiaOpen Targets
0.03Suggestive
colon adenocarcinomaOpen Targets
0.03Suggestive
malignant colon neoplasmOpen Targets
0.03Suggestive
paroxysmal tachycardiaOpen Targets
0.03Suggestive
depressive disorderOpen Targets
0.03Suggestive
colorectal adenocarcinomaOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.01Suggestive
type 2 diabetes mellitusOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ELAC2Protein interaction86%FEN1Protein interaction74%DNASE2BShared pathway50%DNASE2Shared pathway25%DFFBShared pathway25%DNASE1L3Shared pathway25%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
33%
Brain
25%
Ovary
25%
Lung
25%
Liver
20%
Gene Interaction Network
Click a node to explore
EXOGELAC2FEN1DNASE2BDNASE2DFFBDNASE1L3
PROTEIN STRUCTURE
Preparing viewer…
PDB9FXN · 1.62 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.77LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.24 [0.86–1.77]
RankingsWhere EXOG stands among ~20K protein-coding genes
  • #10,468of 20,598
    Most Researched38
  • #16,438of 17,882
    Most Constrained (LOEUF)1.77
Genes detectedEXOG
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Mitochondrial exonuclease EXOG supports DNA integrity by the removal of single-stranded DNA flaps.
PMID: 40042814
Nucleic Acids Res · 2025
1.00
2
In vitro reconstitution reveals a key role of human mitochondrial EXOG in RNA primer processing.
PMID: 35819194
Nucleic Acids Res · 2022
0.90
3
Human EXOG Possesses Strong AP Hydrolysis Activity: Implication on Mitochondrial DNA Base Excision Repair.
PMID: 36516439
J Am Chem Soc · 2022
0.80
4
A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication.
PMID: 30949702
Nucleic Acids Res · 2019
0.70
5
EXOG, a novel paralog of Endonuclease G in higher eukaryotes.
PMID: 18187503
Nucleic Acids Res · 2008
0.60