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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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EOMES
eomesodermin
Chromosome 3 · 3p24.1
NCBI Gene: 8320Ensembl: ENSG00000163508.13HGNC: HGNC:3372UniProt: B7Z4K0
75PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
sequence-specific DNA bindingpositive regulation of transcription by RNA polymerase IICD8-positive, alpha-beta T cell differentiation involved in immune responsebrain developmentneurodegenerative diseaserheumatoid arthritisnon-Hodgkins lymphomachronic lymphocytic leukemia
✦AI Summary

EOMES (eomesodermin) is a transcription factor that plays critical roles in T cell differentiation and function, particularly in CD8+ T cells during immune responses. EOMES regulates the expression of cytotoxic genes and exhaustion markers in CD8+ T cells, with EOMES+ effector memory T cells being significantly more abundant in melanoma patients responding to anti-PD-1/anti-CTLA-4 combination immunotherapy 1. The transcription factor is associated with IFNγ regulation in GZMK+ effector memory T cells within colorectal tumors 2. EOMES expression can be epigenetically upregulated by metabolites like itaconate, which promotes CD8+ T cell exhaustion through succinate-dependent H3K4me3 modifications of the EOMES promoter, leading to increased PD-1 and TIM-3 expression 3. In autoimmune vasculitis, EOMES+ cytotoxic CD4+ T cells represent one of two effector populations derived from stem-like TCF1+ CD4+ T cells that maintain chr3 inflammation 4. Additionally, EOMES has been identified as part of transcription factor networks in triple-negative breast cancer immune signatures 5. Beyond immune function, EOMES contributes to cortical development by regulating basal progenitor cells expressing both PAX6 and EOMES, which are important for cortical expansion 6.

Sources cited
1
EOMES+ effector memory T cells are more abundant in melanoma patients responding to combination immunotherapy
PMID: 30753825
2
EOMES is associated with IFNγ regulation in GZMK+ effector memory T cells in colorectal tumors
PMID: 30479382
3
Itaconate upregulates EOMES expression through epigenetic modifications, promoting CD8+ T cell exhaustion
PMID: 38071226
4
EOMES+ cytotoxic T cells are effector populations in autoimmune vasculitis derived from stem-like CD4+ T cells
PMID: 37672564
5
EOMES is part of transcription factor networks in triple-negative breast cancer immune signatures
PMID: 30594216
6
EOMES is expressed in basal progenitor cells important for cortical expansion during neurogenesis
PMID: 38442714
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.51Moderate
rheumatoid arthritisOpen Targets
0.50Moderate
non-Hodgkins lymphomaOpen Targets
0.47Moderate
chronic lymphocytic leukemiaOpen Targets
0.46Moderate
lymphoid neoplasmOpen Targets
0.46Moderate
Hodgkins lymphomaOpen Targets
0.44Moderate
multiple myelomaOpen Targets
0.41Moderate
follicular lymphomaOpen Targets
0.41Moderate
microcephaly-polymicrogyria-corpus callosum agenesis syndromeOpen Targets
0.40Weak
Microcephaly - polymicrogyria - corpus callosum agenesisOpen Targets
0.37Weak
hematopoietic and lymphoid cell neoplasmOpen Targets
0.34Weak
Cutaneous Follicular LymphomaOpen Targets
0.33Weak
lymphatic system cancerOpen Targets
0.33Weak
clavicle fractureOpen Targets
0.30Weak
preeclampsiaOpen Targets
0.29Weak
corneal neovascularizationOpen Targets
0.29Weak
shoulder fractureOpen Targets
0.29Weak
mathematical abilityOpen Targets
0.24Weak
multiple sclerosisOpen Targets
0.22Weak
macular telangiectasia type 2Open Targets
0.20Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CD8AProtein interaction100%POU5F1Protein interaction100%IFNGProtein interaction99%IL7RProtein interaction96%CD27Protein interaction93%LAG3Protein interaction91%
Tissue Expression6 tissues
Lung
100%
Liver
93%
Bone Marrow
91%
Heart
15%
Ovary
8%
Brain
5%
Gene Interaction Network
Click a node to explore
EOMESCD8APOU5F1IFNGIL7RCD27LAG3
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt O95936
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.49Moderately Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.33 [0.22–0.49]
RankingsWhere EOMES stands among ~20K protein-coding genes
  • #6,325of 20,598
    Most Researched75
  • #2,917of 17,882
    Most Constrained (LOEUF)0.49 · top quartile
Genes detectedEOMES
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer.
PMID: 30479382
Nature · 2018
1.00
2
Distinct Immune Cell Populations Define Response to Anti-PD-1 Monotherapy and Anti-PD-1/Anti-CTLA-4 Combined Therapy.
PMID: 30753825
Cancer Cell · 2019
0.90
3
Classification of triple-negative breast cancers based on Immunogenomic profiling.
PMID: 30594216
J Exp Clin Cancer Res · 2018
0.80
4
Itaconate promotes hepatocellular carcinoma progression by epigenetic induction of CD8
PMID: 38071226
Nat Commun · 2023
0.70
5
In vivo macrophage engineering reshapes the tumor microenvironment leading to eradication of liver metastases.
PMID: 37863068
Cancer Cell · 2023
0.60