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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
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ESCO2
establishment of sister chromatid cohesion N-acetyltransferase 2
Chromosome 8 Β· 8p21.1
NCBI Gene: 157570Ensembl: ENSG00000171320.15HGNC: HGNC:27230UniProt: Q56NI9
61PubMed Papers
22Diseases
0Drugs
155Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
nucleoplasmchromosomeacetyltransferase activityregulation of DNA replicationRoberts-SC phocomelia syndromeJuberg-Hayward syndromeAbsent radiusgenetic disorder
✦AI Summary

ESCO2 is an acetyltransferase essential for establishing sister chr8 cohesion by acetylating the cohesin component SMC3 during S phase 123. This acetylation stabilizes cohesin complex conformation and couples cohesion establishment with DNA replication to ensure proper chromosome 8 4. Beyond cohesion, ESCO2 participates in DNA damage repair and genome integrity maintenance; in response to DNA damage, ATM phosphorylates ESCO2, enabling its recruitment to double-strand breaks where it regulates chr8 structure and promotes 53BP1-mediated repair 4. ESCO2 also functions in antiviral immunity by lactylating ALKBH5, which enhances interferon-beta mRNA biogenesis against herpesviruses 5. Clinically, ESCO2 mutations cause Roberts syndrome, a cohesinopathy characterized by developmental abnormalities 67. In cancer, ESCO2 is frequently upregulated and serves as a pan-cancer prognostic biomarker, with elevated expression correlating with poor survival in multiple malignancies including renal cell carcinoma, hepatocellular carcinoma, and lung adenocarcinoma 8. ESCO2 knockdown inhibits cancer cell proliferation and sensitizes cells to chemotherapy 849. Additionally, ESCO2 upregulation is associated with rheumatoid arthritis pathogenesis 10, suggesting roles in immune regulation beyond viral responses.

Sources cited
1
ESCO2 is an acetyltransferase required for establishment of sister chromatid cohesion
PMID: 15821733
2
ESCO2 is required for establishment of sister chromatid cohesion
PMID: 15958495
3
ESCO2 acetylates the cohesin component SMC3
PMID: 21111234
4
ATM-ESCO2-SMC3 axis regulates DNA damage response, stabilizes cohesin complex, and promotes 53BP1 recruitment for genome integrity maintenance
PMID: 37377435
5
ESCO2 lactylates ALKBH5 to regulate antiviral innate immune responses against DNA herpesviruses through m6A modification
PMID: 39413129
6
ESCO2 mutations cause Roberts syndrome cohesinopathy with developmental abnormalities
PMID: 31516082
7
ESCO2 and cohesin mutations in Roberts syndrome and Cornelia de Lange syndrome share mechanistic overlap with thalidomide teratogenicity
PMID: 34989322
8
ESCO2 is upregulated in 30 of 33 cancer types and serves as pan-cancer biomarker with poor prognosis correlation; ESCO2 knockdown inhibits cancer cell proliferation and invasion
PMID: 38605349
9
ESCO2 knockdown inhibits gastric cancer cell proliferation, induces apoptosis, and suppresses tumor xenograft development
PMID: 29330052
10
ESCO2 expression is significantly upregulated in peripheral blood mononuclear cells from rheumatoid arthritis patients
PMID: 36104638
Disease Associationsβ“˜22
Roberts-SC phocomelia syndromeOpen Targets
0.83Strong
Juberg-Hayward syndromeOpen Targets
0.71Strong
Absent radiusOpen Targets
0.46Moderate
genetic disorderOpen Targets
0.45Moderate
glomerulonephritisOpen Targets
0.27Weak
temporal arteritisOpen Targets
0.16Weak
Hereditary breast and ovarian cancer syndromeOpen Targets
0.12Weak
hereditary breast ovarian cancer syndromeOpen Targets
0.12Weak
neoplasmOpen Targets
0.10Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
lung adenocarcinomaOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
cancerOpen Targets
0.07Suggestive
renal cell carcinomaOpen Targets
0.07Suggestive
insomniaOpen Targets
0.07Suggestive
Abruptio PlacentaeOpen Targets
0.03Suggestive
uterine leiomyosarcomaOpen Targets
0.03Suggestive
colorectal cancerOpen Targets
0.03Suggestive
gastric cancerOpen Targets
0.02Suggestive
Juberg-Hayward syndromeUniProt
Roberts-SC phocomelia syndromeUniProt
Pathogenic Variants155
NM_001017420.3(ESCO2):c.879_880del (p.Arg293fs)Pathogenic
not provided|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 293
NM_001017420.3(ESCO2):c.1131+1G>APathogenic
not provided|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2026
NM_001017420.3(ESCO2):c.294_297del (p.Arg99fs)Pathogenic
not provided|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 99
NM_001017420.3(ESCO2):c.1654C>T (p.Arg552Ter)Pathogenic
Juberg-Hayward syndrome|not provided|Roberts-SC phocomelia syndrome;Juberg-Hayward syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 552
NM_001017420.3(ESCO2):c.876_879del (p.Asp292fs)Pathogenic
not provided|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 292
NM_001017420.3(ESCO2):c.491dup (p.Asn164fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome;Juberg-Hayward syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 164
NM_001017420.3(ESCO2):c.894delinsTTTTAT (p.Glu298fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 298
NM_001017420.3(ESCO2):c.505C>T (p.Arg169Ter)Pathogenic
not provided|Roberts-SC phocomelia syndrome|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 169
NM_001017420.3(ESCO2):c.118_119del (p.Asn39_Ser40insTer)Pathogenic
not provided|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 39
NM_001017420.3(ESCO2):c.845_848del (p.Lys282fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 282
NM_001017420.3(ESCO2):c.1111_1112insT (p.Thr371fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 371
NM_001017420.3(ESCO2):c.715_716del (p.Glu239fs)Likely pathogenic
Roberts-SC phocomelia syndrome;Juberg-Hayward syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 239
NM_001017420.3(ESCO2):c.751dup (p.Glu251fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 251
NM_001017420.3(ESCO2):c.648dup (p.Ser217fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 217
NM_001017420.3(ESCO2):c.307_311del (p.Lys103fs)Pathogenic
not provided|ESCO2-related disorder|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 103
NM_001017420.3(ESCO2):c.308_309del (p.Lys103fs)Pathogenic
not provided|Roberts-SC phocomelia syndrome|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 103
NM_001017420.3(ESCO2):c.1622del (p.Phe541fs)Likely pathogenic
not provided|Roberts-SC phocomelia syndrome;Juberg-Hayward syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 541
NM_001017420.3(ESCO2):c.760dup (p.Thr254fs)Pathogenic
not provided|Juberg-Hayward syndrome;Roberts-SC phocomelia syndrome|Roberts-SC phocomelia syndrome|ESCO2-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 254
NM_001017420.3(ESCO2):c.1427_1431del (p.Ile476fs)Likely pathogenic
Roberts-SC phocomelia syndrome;Juberg-Hayward syndrome|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 476
NM_001017420.3(ESCO2):c.1132-7A>GPathogenic
not provided|Roberts-SC phocomelia syndrome
β˜…β˜…β˜†β˜†2025
View on ClinVar β†—
Related Genes
RFC4Protein interaction100%PCNAProtein interaction100%CDK1Protein interaction100%BUB1Protein interaction99%KAT2BProtein interaction97%WDHD1Protein interaction97%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
26%
Liver
4%
Lung
3%
Heart
2%
Ovary
2%
Gene Interaction Network
Click a node to explore
ESCO2RFC4PCNACDK1BUB1KAT2BWDHD1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q56NI9
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.01LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.79 [0.62–1.01]
RankingsWhere ESCO2 stands among ~20K protein-coding genes
  • #7,548of 20,598
    Most Researched61
  • #492of 5,498
    Most Pathogenic Variants155 Β· top 10%
  • #9,886of 17,882
    Most Constrained (LOEUF)1.01
Genes detectedESCO2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
ESCO2's oncogenic role in human tumors: a pan-cancer analysis and experimental validation.
PMID: 38605349
BMC Cancer Β· 2024
1.00
2
ATM-ESCO2-SMC3 axis promotes 53BP1 recruitment in response to DNA damage and safeguards genome integrity by stabilizing cohesin complex.
PMID: 37377435
Nucleic Acids Res Β· 2023
0.90
3
The expanding phenotypes of cohesinopathies: one ring to rule them all!
PMID: 31516082
Cell Cycle Β· 2019
0.80
4
Lactylation of RNA m
PMID: 39413129
Proc Natl Acad Sci U S A Β· 2024
0.70
5
Upregulation of KAT2B and ESCO2 gene expression level in patients with rheumatoid arthritis.
PMID: 36104638
Clin Rheumatol Β· 2023
0.60