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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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FCN2
ficolin 2
Chromosome 9 · 9q34.3
NCBI Gene: 2220Ensembl: ENSG00000160339.17HGNC: HGNC:3624UniProt: Q15485
132PubMed Papers
20Diseases
0Drugs
1Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
antigen bindingopsonizationrecognition of apoptotic celldefense response to Gram-negative bacteriumhypopituitarismhepatocellular carcinomamale infertilityneoplasm
✦AI Summary

FCN2 encodes ficolin-2, a calcium-dependent lectin that functions as a pattern recognition receptor in innate immunity by initiating the lectin pathway of complement activation 1. The protein specifically recognizes and binds carbohydrates including N-acetylglucosamine, phosphocholine, and lipoteichoic acid on pathogen surfaces, leading to activation of MASP1 serine protease and subsequent complement cascade activation that promotes phagocytosis and pathogen clearance. FCN2 exhibits significant genetic polymorphisms that affect both protein expression levels and functional capacity 2. Promoter region polymorphisms at positions -986, -602, and -4 influence serum ficolin-2 concentrations, while structural variants in the fibrinogen-like domain alter carbohydrate binding affinity 2. These functional variants show distinct geographical distribution patterns across populations 3. Clinically, FCN2 polymorphisms have been associated with rheumatic fever susceptibility, with certain genotypes conferring protective effects 4. The protein also serves as a biomarker in neurological conditions, with CSF ficolin-2 levels identified as part of protein signatures that predict disease progression in multiple sclerosis 1. Additionally, ficolin-2 functions as an endocrine factor facilitating inter-organ communication in cardiometabolic disorders 5.

Sources cited
1
FCN2 encodes ficolin-2 as a pattern recognition receptor and serves as biomarker for multiple sclerosis progression
PMID: 37903821
2
FCN2 polymorphisms affect serum ficolin-2 concentration and carbohydrate binding function
PMID: 15879437
3
FCN2 variants show distinct geographical distribution patterns across populations
PMID: 22594803
4
FCN2 polymorphisms are associated with rheumatic fever susceptibility with some genotypes being protective
PMID: 28576308
5
Ficolin-2 functions as an endocrine factor in cardiometabolic disorders
PMID: 36276926
Disease Associationsⓘ20
hypopituitarismOpen Targets
0.28Weak
hepatocellular carcinomaOpen Targets
0.11Weak
male infertilityOpen Targets
0.10Weak
neoplasmOpen Targets
0.10Suggestive
Immunodeficiency due to a late component of complements deficiencyOpen Targets
0.10Suggestive
systemic lupus erythematosusOpen Targets
0.09Suggestive
systemic sclerodermaOpen Targets
0.09Suggestive
infectionOpen Targets
0.09Suggestive
liver cancerOpen Targets
0.08Suggestive
rheumatic heart diseaseOpen Targets
0.07Suggestive
Chronic mucocutaneous candidosisOpen Targets
0.07Suggestive
recurrent Neisseria infections due to factor D deficiencyOpen Targets
0.07Suggestive
immunodeficiency 28Open Targets
0.07Suggestive
Mendelian susceptibility to mycobacterial diseases due to complete IFNgammaR2 deficiencyOpen Targets
0.07Suggestive
Pituitary Gland AdenomaOpen Targets
0.07Suggestive
Townes-Brocks syndromeOpen Targets
0.07Suggestive
varicella, severe recurrentOpen Targets
0.07Suggestive
candidiasis, familial, 4Open Targets
0.06Suggestive
visceral LeishmaniasisOpen Targets
0.06Suggestive
lung cancerOpen Targets
0.06Suggestive
Pathogenic Variants1
NM_004108.3(FCN2):c.559+1G>TLikely pathogenic
Susceptibility to severe COVID-19
★☆☆☆2024
View on ClinVar ↗
Related Genes
CFHProtein interaction100%KIR2DL5BProtein interaction97%MASP1Protein interaction94%CALRProtein interaction91%C1RProtein interaction86%C1SProtein interaction86%
Tissue Expression6 tissues
Liver
100%
Ovary
1%
Lung
0%
Brain
0%
Bone Marrow
0%
Heart
0%
Gene Interaction Network
Click a node to explore
FCN2CFHKIR2DL5BMASP1CALRC1RC1S
PROTEIN STRUCTURE
Preparing viewer…
PDB2J1G · 1.95 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.17LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.86 [0.64–1.17]
RankingsWhere FCN2 stands among ~20K protein-coding genes
  • #3,522of 20,598
    Most Researched132 · top quartile
  • #4,803of 5,498
    Most Pathogenic Variants1
  • #12,216of 17,882
    Most Constrained (LOEUF)1.17
Genes detectedFCN2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Proteomics reveal biomarkers for diagnosis, disease activity and long-term disability outcomes in multiple sclerosis.
PMID: 37903821
Nat Commun · 2023
1.00
2
MBL2 and FCN2 gene polymorphisms in a cohort of Italian children with rheumatic fever: A case-control study.
PMID: 28576308
Semin Arthritis Rheum · 2017
0.90
3
Polymorphisms in the FCN2 gene determine serum variation and function of Ficolin-2.
PMID: 15879437
Hum Mol Genet · 2005
0.80
4
Inflammatory proteins associated with Alzheimer's disease reduced by a GLP1 receptor agonist: a post hoc analysis of the EXSCEL randomized placebo controlled trial.
PMID: 39358806
Alzheimers Res Ther · 2024
0.70
5
The Lack of Association between FCN2 Gene Promoter Region Polymorphisms and Dental Caries in Polish Children.
PMID: 28088794
Caries Res · 2017
0.60