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GeneE
25 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
GARS1
glycyl-tRNA synthetase 1
Chromosome 7 Β· 7p14.3
NCBI Gene: 2617Ensembl: ENSG00000106105.16HGNC: HGNC:4162UniProt: P41250
190PubMed Papers
23Diseases
0Drugs
30Pathogenic Variants
RESEARCH IMPACT
Trending
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
mitochondrionbis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activityglycine-tRNA ligase activitytRNA aminoacylation for protein translationCharcot-Marie-Tooth disease type 2DAutosomal dominant Charcot-Marie-Tooth disease type 2Dneuronopathy, distal hereditary motor, type 5ADistal hereditary motor neuropathy type 5
✦AI Summary

GARS1 encodes glycyl-tRNA synthetase 1, a cytosolic enzyme that catalyzes the ATP-dependent ligation of glycine to its cognate tRNA (tRNAGly), a critical step in protein synthesis 123. Beyond translation, GARS1 produces diadenosine tetraphosphate (Ap4A), a pleiotropic signaling molecule involved in cellular regulation 4. GARS1 functions as a homodimer and localizes to the cytosol, mitochondrial matrix, and is secreted via extracellular vesicles 5. Pathogenic heterozygous GARS1 mutations cause autosomal dominant Charcot-Marie-Tooth disease type 2D and hereditary motor neuropathy through a gain-of-function mechanism involving tRNAGly sequestration 6. This sequestration depletes cellular tRNAGly pools, causing ribosome stalling at glycine codons and protein synthesis defects in peripheral neurons 6. GARS1 variants are among the most common causative genes in inherited peripheral neuropathies 7. Beyond neurological disease, GARS1 is upregulated across multiple cancer types and serves as a prognostic biomarker associated with poor survival 89. GARS1-containing extracellular vesicles promote M1 macrophage polarization and demonstrate anti-tumor activity 5. GARS1 expression correlates with immune infiltration and checkpoint markers, suggesting potential value in immunotherapy response prediction 9.

Sources cited
1
GARS1 catalyzes ATP-dependent ligation of glycine to tRNA via aminoacyl-adenylate intermediate formation
PMID: 17544401
2
GARS1 catalyzes glycyl-tRNA synthetase activity in protein translation
PMID: 24898252
3
GARS1 catalyzes glycyl-tRNA aminoacylation
PMID: 28675565
4
GARS1 produces diadenosine tetraphosphate (Ap4A) via ATP condensation and may regulate Ap4A homeostasis
PMID: 19710017
5
GARS1 is secreted via extracellular vesicles and localizes to multiple cellular compartments
PMID: 35523311
6
GARS1 peripheral neuropathy mutations cause pathogenic tRNAGly sequestration leading to ribosome stalling at glycine codons and protein synthesis defects
PMID: 40119731
7
GARS1 variants are among the most common genes causing autosomal dominant inherited peripheral neuropathies
PMID: 38549004
8
GARS1 is highly expressed across cancers, especially in bladder cancer, and correlates with poor survival and immune cell infiltration
PMID: 39152248
9
GARS1 expression is upregulated across cancer types and correlates with immune checkpoint genes and immune infiltrating cells
PMID: 37404826
Disease Associationsβ“˜23
Charcot-Marie-Tooth disease type 2DOpen Targets
0.78Strong
Autosomal dominant Charcot-Marie-Tooth disease type 2DOpen Targets
0.74Strong
neuronopathy, distal hereditary motor, type 5AOpen Targets
0.73Strong
Distal hereditary motor neuropathy type 5Open Targets
0.69Moderate
spinal muscular atrophy, infantile, James typeOpen Targets
0.65Moderate
Charcot-Marie-Tooth disease type 2Open Targets
0.55Moderate
Charcot-Marie-Tooth diseaseOpen Targets
0.51Moderate
genetic disorderOpen Targets
0.34Weak
Tip-toe gaitOpen Targets
0.26Weak
NephropathyOpen Targets
0.21Weak
placental retentionOpen Targets
0.21Weak
nephritisOpen Targets
0.20Weak
distal hereditary motor neuropathyOpen Targets
0.19Weak
neuronopathy, distal hereditary motor, type 5Open Targets
0.17Weak
axonal neuropathyOpen Targets
0.15Weak
Charcot-Marie-Tooth disease type 5Open Targets
0.12Weak
Parkinson diseaseOpen Targets
0.12Weak
parkinsonian disorderOpen Targets
0.12Weak
motor neuron diseaseOpen Targets
0.11Weak
neuronopathy, distal hereditary motor, autosomal dominantOpen Targets
0.11Weak
Charcot-Marie-Tooth disease, axonal, type 2DUniProt
Neuronopathy, distal hereditary motor, autosomal dominant 5UniProt
Spinal muscular atrophy, infantile, James typeUniProt
Pathogenic Variants30
NM_002047.4(GARS1):c.598G>A (p.Asp200Asn)Pathogenic
Charcot-Marie-Tooth disease|Charcot-Marie-Tooth disease type 2|Neuronopathy, distal hereditary motor, type 5|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 200
NM_002047.4(GARS1):c.880G>C (p.Gly294Arg)Pathogenic
Charcot-Marie-Tooth disease type 2D|not provided|Charcot-Marie-Tooth disease type 2|Charcot-Marie-Tooth disease|not specified
β˜…β˜…β˜†β˜†2025β†’ Residue 294
NM_002047.4(GARS1):c.1001T>C (p.Ile334Thr)Pathogenic
Charcot-Marie-Tooth disease type 2|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 334
NM_002047.4(GARS1):c.979G>A (p.Gly327Arg)Pathogenic
Charcot-Marie-Tooth disease type 2|Neuronopathy, distal hereditary motor, type 5A|Charcot-Marie-Tooth disease type 2D
β˜…β˜…β˜†β˜†2024β†’ Residue 327
NM_002047.4(GARS1):c.794C>T (p.Ser265Phe)Pathogenic
not provided|Charcot-Marie-Tooth disease|Charcot-Marie-Tooth disease type 2|Neuronopathy, distal hereditary motor, type 5
β˜…β˜…β˜†β˜†2024β†’ Residue 265
NM_002047.4(GARS1):c.1015G>A (p.Gly339Arg)Pathogenic
not provided|Neuronopathy, distal hereditary motor, type 5A|Charcot-Marie-Tooth disease type 2
β˜…β˜…β˜†β˜†2024β†’ Residue 339
NM_002047.4(GARS1):c.1000A>T (p.Ile334Phe)Pathogenic
Charcot-Marie-Tooth disease type 2|Charcot-Marie-Tooth disease|Distal spinal muscular atrophy|not provided|Charcot-Marie-Tooth disease type 2D|Neuronopathy, distal hereditary motor, type 5A|Neuronopathy, distal hereditary motor, type 5
β˜…β˜…β˜†β˜†2023β†’ Residue 334
NM_002047.4(GARS1):c.1415A>G (p.His472Arg)Pathogenic
Charcot-Marie-Tooth disease type 2|Neuronopathy, distal hereditary motor, type 5A|Distal spinal muscular atrophy|Charcot-Marie-Tooth disease|Charcot-Marie-Tooth disease type 2D|not specified
β˜…β˜…β˜†β˜†2023β†’ Residue 472
NM_002047.4(GARS1):c.1001T>A (p.Ile334Asn)Pathogenic
Charcot-Marie-Tooth disease type 2|Spinal muscular atrophy, infantile, James type|Charcot-Marie-Tooth disease type 2D
β˜…β˜…β˜†β˜†2022β†’ Residue 334
NM_002047.4(GARS1):c.815T>G (p.Leu272Arg)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 272
NM_002047.4(GARS1):c.1001T>G (p.Ile334Ser)Pathogenic
Charcot-Marie-Tooth disease type 2
β˜…β˜†β˜†β˜†2024β†’ Residue 334
NM_002047.4(GARS1):c.893C>G (p.Pro298Arg)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 298
NM_002047.4(GARS1):c.999G>C (p.Glu333Asp)Pathogenic
Charcot-Marie-Tooth disease type 2
β˜…β˜†β˜†β˜†2023β†’ Residue 333
NM_002047.4(GARS1):c.1007C>T (p.Pro336Leu)Likely pathogenic
Charcot-Marie-Tooth disease type 2
β˜…β˜†β˜†β˜†2022β†’ Residue 336
NM_002047.4(GARS1):c.1462G>T (p.Glu488Ter)Pathogenic
not specified
β˜…β˜†β˜†β˜†2022β†’ Residue 488
NM_002047.4(GARS1):c.1415dup (p.His472fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2021β†’ Residue 472
NM_002047.4(GARS1):c.1738G>C (p.Gly580Arg)Pathogenic
Neuronopathy, distal hereditary motor, type 5A|Distal spinal muscular atrophy|Charcot-Marie-Tooth disease type 2D|Charcot-Marie-Tooth disease type 2
β˜…β˜†β˜†β˜†2021β†’ Residue 580
NM_002047.4(GARS1):c.548T>C (p.Leu183Pro)Pathogenic
Neuronopathy, distal hereditary motor, type 5A|Charcot-Marie-Tooth disease|not provided|Charcot-Marie-Tooth disease type 2D
β˜…β˜†β˜†β˜†2020β†’ Residue 183
NM_002047.4(GARS1):c.1034A>G (p.Glu345Gly)Likely pathogenic
Charcot-Marie-Tooth disease type 2
β˜…β˜†β˜†β˜†2020β†’ Residue 345
NM_002047.4(GARS1):c.1705G>A (p.Glu569Lys)Likely pathogenic
Charcot-Marie-Tooth disease type 2
β˜…β˜†β˜†β˜†2019β†’ Residue 569
View on ClinVar β†—
Related Genes
LARS1Protein interaction100%QARS1Protein interaction100%KARS1Protein interaction100%IARS1Protein interaction100%LARS2Protein interaction98%IARS2Protein interaction98%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
57%
Lung
53%
Liver
41%
Heart
40%
Ovary
35%
Gene Interaction Network
Click a node to explore
GARS1LARS1QARS1KARS1IARS1LARS2IARS2
PROTEIN STRUCTURE
Preparing viewer…
PDB2ZT5 Β· 2.50 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.65LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.49 [0.37–0.65]
RankingsWhere GARS1 stands among ~20K protein-coding genes
  • #2,250of 20,598
    Most Researched190 Β· top quartile
  • #1,793of 5,498
    Most Pathogenic Variants30
  • #4,680of 17,882
    Most Constrained (LOEUF)0.65
Genes detectedGARS1
Sources retrieved25 papers
Response timeβ€”
πŸ“„ Sources
25β–Ό
1
A 20-year Clinical and Genetic Neuromuscular Cohort Analysis in Lebanon: An International Effort.
PMID: 34602496
J Neuromuscul Dis Β· 2022
1.00
2
PMID: 20301420
0.90
3
Variants in mitochondrial disease genes are common causes of inherited peripheral neuropathies.
PMID: 38549004
J Neurol Β· 2024
0.80
4
GARS-related disease in infantile spinal muscular atrophy: Implications for diagnosis and treatment.
PMID: 32181591
Am J Med Genet A Β· 2020
0.72
5
Multiple omics integrative analysis identifies GARS1 as a novel prognostic and immunological biomarker: from pan-cancer to bladder cancer.
PMID: 39152248
Sci Rep Β· 2024
0.70