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GeneE
25 sources retrieved ยท Most recent: April 2026 ยท Index updated 15 days ago
โ“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
GRIN2B
glutamate ionotropic receptor NMDA type subunit 2B
Chromosome 12 ยท 12p13.1
NCBI Gene: 2904Ensembl: ENSG00000273079.7HGNC: HGNC:4586UniProt: A0A8D9PHB2
410PubMed Papers
22Diseases
32Drugs
275Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub GeneIon ChannelReceptorTransporter
RESEARCH IMPACT
Highly StudiedTrendingVariant-Rich
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
โœ“ Experimental GO Evidenceโœ“ Swiss-Prot Reviewed
NMDA glutamate receptor activitymonoatomic cation transmembrane transportcalcium ion transmembrane import into cytosolNMDA selective glutamate receptor complexintellectual disability, autosomal dominant 6infantile spasmsAlzheimer diseasecomplex neurodevelopmental disorder
โœฆAI Summary

GRIN2B encodes the GluN2B subunit of N-methyl-D-aspartate (NMDA) receptors, heterotetrameric ligand-gated ion channels with high calcium permeability 1. Channel activation requires L-glutamate binding to GluN2B, glycine/D-serine binding to GluN1, and membrane depolarization to relieve Mg2+ block 1. GluN2B confers differential channel kinetics, pH sensitivity, and calcium permeability 2. GRIN2B variants cause developmental and epileptic encephalopathy 27 and intellectual developmental disorder, presenting with neurodevelopmental delay, epilepsy, autism, movement disorders, and cortical visual impairment 3. De novo variants account for approximately 1% of sporadic autism spectrum disorders 4. Missense variants cluster in transmembrane segments and ligand-binding domains, producing diverse gain-of-function and loss-of-function mechanisms 3. Recent structural studies reveal ketamine binds the central vestibule through interactions with leucine 643 on GluN2B and asparagine 616 on GluN1, enabling therapeutic channel blockade for antidepressant effects 5. Functional characterization of disease variants remains incomplete but suggests altered NMDAR function correlates with clinical severity 6. Memantine, a use-dependent NMDAR blocker, shows promise but requires further clinical validation in GRIN2B encephalopathy 3.

Sources cited
1
GRIN2B is a component of NMDA receptors functioning as heterotetrameric ligand-gated cation channels requiring L-glutamate, glycine/D-serine, and depolarization for activation
PMID: 24272827
2
GluN2B confers differential channel properties including kinetics and calcium permeability
PMID: 28095420
3
GRIN2B variants cause developmental encephalopathy with epilepsy, developmental delay, autism, movement disorders, and cortical visual impairment; missense variants cluster in transmembrane and ligand-binding sites
PMID: 28377535
4
Recurrent disruptive mutations in GRIN2B contribute to approximately 1% of sporadic autism spectrum disorders
PMID: 23160955
5
S-ketamine binds GRIN2B through leucine 643 and GluN1 asparagine 616, enabling channel blockade for antidepressant effects
PMID: 34321660
6
Disease-associated GRIN2B variants alter NMDAR function through gain-of-function or loss-of-function mechanisms
PMID: 38836461
Disease Associationsโ“˜22
intellectual disability, autosomal dominant 6Open Targets
0.78Strong
infantile spasmsOpen Targets
0.74Strong
Alzheimer diseaseOpen Targets
0.63Moderate
complex neurodevelopmental disorderOpen Targets
0.62Moderate
Parkinson diseaseOpen Targets
0.62Moderate
developmental and epileptic encephalopathy, 27Open Targets
0.62Moderate
epilepsyOpen Targets
0.60Moderate
infectionOpen Targets
0.60Moderate
influenzaOpen Targets
0.60Moderate
alcohol dependenceOpen Targets
0.59Moderate
major depressive disorderOpen Targets
0.59Moderate
dementiaOpen Targets
0.58Moderate
autism spectrum disorderOpen Targets
0.56Moderate
cerebral atherosclerosisOpen Targets
0.56Moderate
postencephalitic Parkinson diseaseOpen Targets
0.56Moderate
secondary Parkinson diseaseOpen Targets
0.56Moderate
genetic disorderOpen Targets
0.54Moderate
Intellectual disabilityOpen Targets
0.54Moderate
depressive disorderOpen Targets
0.54Moderate
PainOpen Targets
0.53Moderate
Developmental and epileptic encephalopathy 27UniProt
Intellectual developmental disorder, autosomal dominant 6, with or without seizuresUniProt
Pathogenic Variants275
NM_000834.5(GRIN2B):c.2065G>A (p.Gly689Ser)Pathogenic
Intellectual disability, autosomal dominant 6|not provided|Developmental and epileptic encephalopathy, 27|Complex neurodevelopmental disorder|Intellectual disability, autosomal dominant 6;Developmental and epileptic encephalopathy, 27|Developmental disorder|Intellectual disability
โ˜…โ˜…โ˜†โ˜†2026โ†’ Residue 689
NM_000834.5(GRIN2B):c.1672G>A (p.Val558Ile)Pathogenic
intellectual deficiency|not specified|Intellectual disability, autosomal dominant 6|Complex neurodevelopmental disorder|See cases|not provided|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|Inborn genetic diseases
โ˜…โ˜…โ˜†โ˜†2026โ†’ Residue 558
NM_000834.5(GRIN2B):c.2116A>G (p.Met706Val)Pathogenic
intellectual deficiency;Ataxia;Epilepsy|Intellectual disability, autosomal dominant 6|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|not provided
โ˜…โ˜…โ˜†โ˜†2026โ†’ Residue 706
NM_000834.5(GRIN2B):c.99dup (p.Ser34fs)Pathogenic
Intellectual disability, autosomal dominant 6|not provided|Intellectual disability|Intellectual disability, autosomal dominant 6;Developmental and epileptic encephalopathy, 27
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 34
NM_000834.5(GRIN2B):c.2459G>C (p.Gly820Ala)Pathogenic
Inborn genetic diseases|not provided|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|Intellectual disability, autosomal dominant 6|Complex neurodevelopmental disorder
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 820
NM_000834.5(GRIN2B):c.1177C>T (p.Arg393Ter)Pathogenic
Complex neurodevelopmental disorder|not provided|Autosomal dominant non-syndromic intellectual disability|Intellectual disability, autosomal dominant 6
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 393
NM_000834.5(GRIN2B):c.2539C>T (p.Arg847Ter)Pathogenic
not provided|Intellectual disability, autosomal dominant 6;Developmental and epileptic encephalopathy, 27|Intellectual disability, autosomal dominant 6|Complex neurodevelopmental disorder|Developmental and epileptic encephalopathy, 27
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 847
NM_000834.5(GRIN2B):c.2172-2A>GPathogenic
Intellectual disability, autosomal dominant 6|not provided
โ˜…โ˜…โ˜†โ˜†2025
NM_000834.5(GRIN2B):c.1619G>A (p.Arg540His)Pathogenic
Intellectual disability, autosomal dominant 6|Intellectual disability|not provided|Inborn genetic diseases|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 540
NM_000834.5(GRIN2B):c.2044C>T (p.Arg682Cys)Pathogenic
Intellectual disability, autosomal dominant 6|Intellectual disability|not provided|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 682
NM_000834.5(GRIN2B):c.3912C>G (p.Tyr1304Ter)Pathogenic
Intellectual disability, autosomal dominant 6|not provided
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 1304
NM_000834.5(GRIN2B):c.2087G>A (p.Arg696His)Pathogenic
Intellectual disability, autosomal dominant 6|Inborn genetic diseases|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|not provided|Intellectual disability|Complex neurodevelopmental disorder
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 696
NM_000834.5(GRIN2B):c.2430C>A (p.Ser810Arg)Pathogenic
not provided|Intellectual disability, autosomal dominant 6
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 810
NM_000834.5(GRIN2B):c.2056G>A (p.Val686Met)Pathogenic
Intellectual disability, autosomal dominant 6;Developmental and epileptic encephalopathy, 27|Inborn genetic diseases|not provided
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 686
NM_000834.5(GRIN2B):c.1847A>G (p.Asn616Ser)Pathogenic
Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|Intellectual disability, autosomal dominant 6
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 616
NM_000834.5(GRIN2B):c.2086C>T (p.Arg696Cys)Pathogenic
not provided|Intellectual disability, autosomal dominant 6;Developmental and epileptic encephalopathy, 27|Developmental and epileptic encephalopathy, 27
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 696
NM_000834.5(GRIN2B):c.1555C>T (p.Arg519Ter)Pathogenic
not provided|Intellectual disability, autosomal dominant 6|Complex neurodevelopmental disorder|Intellectual disability|Developmental and epileptic encephalopathy, 27
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 519
NM_000834.5(GRIN2B):c.1079C>T (p.Pro360Leu)Likely pathogenic
Neurodevelopmental disorder|Intellectual disability, autosomal dominant 6
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 360
NM_000834.5(GRIN2B):c.2514C>A (p.Cys838Ter)Pathogenic
Intellectual disability, autosomal dominant 6|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|not provided
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 838
NM_000834.5(GRIN2B):c.1858G>A (p.Val620Met)Likely pathogenic
not provided|Developmental and epileptic encephalopathy, 27;Intellectual disability, autosomal dominant 6|Intellectual disability, autosomal dominant 6|Complex neurodevelopmental disorder
โ˜…โ˜…โ˜†โ˜†2025โ†’ Residue 620
View on ClinVar โ†—
Drug Targets32
ACAMPROSATEApproved
Glutamate [NMDA] receptor antagonist
alcohol dependence
ACAMPROSATE CALCIUMApproved
Glutamate [NMDA] receptor antagonist
alcohol dependence
AMANTADINEApproved
Matrix protein 2 inhibitor
influenza
AMANTADINE HYDROCHLORIDEApproved
Matrix protein 2 inhibitor
influenza
APIMOSTINELPhase II
Glutamate [NMDA] receptor partial agonist
major depressive disorder
AV-101Phase III
Glutamate [NMDA] receptor antagonist
pulmonary arterial hypertension
AZD8108Phase I
Glutamate [NMDA] receptor antagonist
CNS-5161Phase II
Glutamate [NMDA] receptor blocker
neuropathic pain
DELUCEMINEPhase I
Glutamate [NMDA] receptor antagonist
depressive disorder
ESKETAMINEApproved
Glutamate [NMDA] receptor negative allosteric modulator
major depressive disorder
ESKETAMINE HYDROCHLORIDEApproved
Glutamate [NMDA] receptor negative allosteric modulator
major depressive disorder
EVT-101Phase II
Glutamate NMDA receptor; GRIN1/GRIN2B antagonist
neuropathic pain
FELBAMATEApproved
Glutamate [NMDA] receptor antagonist
epilepsy
GW468816Phase II
Glutamate [NMDA] receptor antagonist
nicotine dependence
INDANTADOLPhase II
Glutamate [NMDA] receptor antagonist
neuropathic pain
KETAMINEApproved
Glutamate [NMDA] receptor negative allosteric modulator
KETAMINE HYDROCHLORIDEPhase III
Glutamate [NMDA] receptor negative allosteric modulator
cancer
LANICEMINEPhase II
Glutamate [NMDA] receptor blocker
major depressive disorder
MEMANTINEApproved
Glutamate [NMDA] receptor negative allosteric modulator
Alzheimer disease
MEMANTINE HYDROCHLORIDEApproved
Glutamate [NMDA] receptor negative allosteric modulator
Alzheimer disease
NEBOGLAMINEPhase II
Glutamate [NMDA] receptor positive allosteric modulator
cocaine dependence
NERAMEXANEPhase III
Neuronal acetylcholine receptor; alpha9/alpha10 antagonist
Alzheimer disease
NERAMEXANE MESYLATEPhase III
Neuronal acetylcholine receptor; alpha9/alpha10 antagonist
Tinnitus
ORPHENADRINEApproved
Glutamate [NMDA] receptor antagonist
Parkinson disease
ORPHENADRINE CITRATEApproved
Glutamate [NMDA] receptor antagonist
Pain
ORPHENADRINE HYDROCHLORIDEApproved
Histamine H1 receptor antagonist
Parkinson disease
PERZINFOTELPhase II
Glutamate [NMDA] receptor antagonist
diabetic neuropathy
RADIPRODILPhase III
Glutamate NMDA receptor; GRIN1/GRIN2B antagonist
RALFINAMIDEPhase III
Glutamate [NMDA] receptor antagonist
neuropathic pain
RAPASTINELPhase III
Glutamate [NMDA] receptor partial agonist
major depressive disorder
RISLENEMDAZPhase II
Glutamate NMDA receptor; GRIN1/GRIN2B antagonist
major depressive disorder
TRAXOPRODILPhase II
Glutamate NMDA receptor; GRIN1/GRIN2B antagonist
Parkinson disease
Related Genes
DPYSL2Protein interaction100%FYNProtein interaction100%GRIK5Protein interaction100%APPProtein interaction100%CASKProtein interaction100%PTPN5Protein interaction99%
Tissue Expression6 tissues
Brain
100%
Liver
2%
Bone Marrow
0%
Ovary
0%
Lung
0%
Heart
0%
Gene Interaction Network
Click a node to explore
GRIN2BDPYSL2FYNGRIK5APPCASKPTPN5
PROTEIN STRUCTURE
Preparing viewerโ€ฆ
PDB7UJR ยท 1.95 ร… ยท X-ray
View on RCSB โ†—
Constraintโ“˜
LOEUFโ“˜
0.10Highly Constrained
pLIโ“˜
1.00Intolerant
Observed/Expected LoF0.05 [0.02โ€“0.10]
RankingsWhere GRIN2B stands among ~20K protein-coding genes
  • #703of 20,598
    Most Researched410 ยท top 5%
  • #114of 1,025
    FDA-Approved Drug Targets13 ยท top quartile
  • #229of 5,498
    Most Pathogenic Variants275 ยท top 5%
  • #64of 17,882
    Most Constrained (LOEUF)0.10 ยท top 1%
Genes detectedGRIN2B
Sources retrieved25 papers
Response timeโ€”
๐Ÿ“„ Sources
25โ–ผ
1
PMID: 28377535
J Med Genet ยท 2017
1.00
2
Structural basis of ketamine action on human NMDA receptors.
PMID: 34321660
Nature ยท 2021
0.90
3
Disease-Associated Variants in GRIN1, GRIN2A and GRIN2B genes: Insights into NMDA Receptor Structure, Function, and Pathophysiology.
PMID: 38836461
Physiol Res ยท 2024
0.80
4
Correlations between GRIN2B and GRIN3A gene polymorphisms and postpartum depressive symptoms in Chinese parturients undergoing cesarean section: A prospective cohort study.
PMID: 36898314
J Psychosom Res ยท 2023
0.72
5
Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.
PMID: 23160955
Science ยท 2012
0.70