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GeneE
14 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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HACD3
3-hydroxyacyl-CoA dehydratase 3
Chromosome 15 · 15q22.31
NCBI Gene: 51495Ensembl: ENSG00000074696.13HGNC: HGNC:24175UniProt: H3BRL8
201PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
very long-chain fatty acid biosynthetic processpositive regulation by virus of viral protein levels in host cellendoplasmic reticulumenzyme bindingcolorectal carcinomanon-small cell lung carcinomaFamilial exudative vitreoretinopathyretinitis pigmentosa
✦AI Summary

HACD3 (3-hydroxyacyl-CoA dehydratase 3) catalyzes the third step of long-chain fatty acid elongation, adding two carbons per cycle to produce very long-chain fatty acids (VLCFAs) 1. This endoplasmic reticulum-bound enzyme converts 3-hydroxyacyl-CoA intermediates to trans-2,3-enoyl-CoA, generating VLCFA precursors for membrane lipids and lipid mediators 2. HACD3 interacts with fatty acid elongase ELOVL proteins and AdipoR2 to facilitate elongation and unsaturated fatty acid incorporation into phospholipids 3. Beyond canonical dehydratase function, HACD3 exhibits non-metabolic roles in disease progression. In non-small cell lung cancer (NSCLC), HACD3 promotes malignancy through direct interaction with MKK7/MAPK10, suppressing MAPK signaling independent of fatty acid metabolism 4. Similarly, in colorectal cancer, HACD3 possesses intrinsic protein kinase activity, phosphorylating CDK2 to stimulate tumorigenesis 5. HACD3 also stabilizes influenza A virus PB1 protein by competing with autophagy receptor p62, preventing autophagic degradation and promoting viral replication 6. Clinically, HACD3 dysregulation associates with metabolic dysfunction-associated steatohepatitis (MASLD), where reduced TCF7l2-mediated transcriptional repression elevates HACD3 expression and triglyceride production 7. These findings establish HACD3 as a multifunctional protein with metabolic and oncogenic roles relevant to diabetes, liver disease, and cancer therapeutics.

Sources cited
1
HACD3 is a 3-hydroxyacyl-CoA dehydratase catalyzing the third step of VLCFA synthesis
PMID: 18554506
2
HACD1 and HACD2 exhibit redundant fatty acid elongation activities; HACD3 exhibits weak activity
PMID: 28784662
3
HACD3 interacts with AdipoR2 and is essential for fatty acid elongation and polyunsaturated fatty acid incorporation into phospholipids
PMID: 37164154
4
HACD3 promotes NSCLC malignant progression by suppressing MKK7/MAPK10 signaling independent of dehydratase activity
PMID: 40817125
5
HACD3 possesses protein kinase activity and phosphorylates CDK2 to promote colorectal cancer progression
PMID: 39547639
6
HACD3 prevents influenza A virus PB1 protein autophagic degradation by competing with p62
PMID: 38793585
7
TCF7l2 transcriptionally represses HACD3; reduced TCF7l2 increases HACD3 expression and triglyceride production in MASLD
PMID: 40172138
Disease Associationsⓘ20
colorectal carcinomaOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.07Suggestive
Familial exudative vitreoretinopathyOpen Targets
0.06Suggestive
retinitis pigmentosaOpen Targets
0.05Suggestive
X-linked retinoschisisOpen Targets
0.05Suggestive
Familial drusenOpen Targets
0.04Suggestive
age-related macular degenerationOpen Targets
0.04Suggestive
snowflake vitreoretinal degenerationOpen Targets
0.04Suggestive
exudative vitreoretinopathy 4Open Targets
0.04Suggestive
exudative vitreoretinopathyOpen Targets
0.04Suggestive
Coats diseaseOpen Targets
0.04Suggestive
birdshot chorioretinopathyOpen Targets
0.04Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.04Suggestive
early-onset non-syndromic cataractOpen Targets
0.04Suggestive
retinitis pigmentosa 86Open Targets
0.04Suggestive
Rare isolated myopiaOpen Targets
0.04Suggestive
persistent hyperplastic primary vitreousOpen Targets
0.04Suggestive
retinitis pigmentosa 84Open Targets
0.04Suggestive
retinopathy of prematurityOpen Targets
0.04Suggestive
cataract 50 with or without glaucomaOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FADS1Protein interaction98%SCDProtein interaction98%HSD17B12Protein interaction98%SCD5Protein interaction92%HACD2Protein interaction77%HACD1Protein interaction77%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
56%
Liver
48%
Ovary
33%
Heart
17%
Lung
14%
Gene Interaction Network
Click a node to explore
HACD3FADS1SCDHSD17B12SCD5HACD2HACD1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9P035
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.85LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.61 [0.45–0.85]
RankingsWhere HACD3 stands among ~20K protein-coding genes
  • #2,094of 20,598
    Most Researched201 · top quartile
  • #7,316of 17,882
    Most Constrained (LOEUF)0.85
Genes detectedHACD3
Sources retrieved14 papers
Response time—
📄 Sources
14▼
1
TCF7l2 Regulates Fatty Acid Chain Elongase HACD3 during Lipid-Induced Stress.
PMID: 40172138
Biochemistry · 2025
1.00
2
HACD3 promotes malignant progression of NSCLC by suppressing the MKK7/MAPK10 signaling axis.
PMID: 40817125
BMC Cancer · 2025
0.90
3
HACD3 Prevents PB1 from Autophagic Degradation to Facilitate the Replication of Influenza A Virus.
PMID: 38793585
Viruses · 2024
0.80
4
AdipoR2 recruits protein interactors to promote fatty acid elongation and membrane fluidity.
PMID: 37164154
J Biol Chem · 2023
0.70
5
Fatty acid dehydratase HACD3 poses protein kinase activity and promotes the malignant progression of colorectal cancer.
PMID: 39547639
Int J Biol Macromol · 2024
0.60