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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
HOMER2
homer scaffold protein 2
Chromosome 15 Β· 15q25.2
NCBI Gene: 9455Ensembl: ENSG00000103942.14HGNC: HGNC:17513UniProt: Q9NSB8
51PubMed Papers
21Diseases
0Drugs
5Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
negative regulation of calcineurin-NFAT signaling cascadesensory perception of soundcytoplasmnegative regulation of interleukin-2 productionautosomal dominant nonsyndromic hearing lossdeafnessovarian dysfunctionpreeclampsia
✦AI Summary

HOMER2 is a postsynaptic scaffolding protein essential for normal hearing and synaptic function. The protein contains an EVH1 domain and coiled-coil domain that are critical for multimerization and protein interactions 1. HOMER2 localizes to stereocilia of inner ear hair cells and regulates intracellular calcium homeostasis and cytoskeletal organization 1. The protein's coiled-coil domain is essential for multimerization and interaction with CDC42, processes crucial for normal auditory function 2. Pathogenic variants in HOMER2 cause autosomal dominant non-syndromic hearing loss (DFNA68), with frameshift mutations leading to progressive sensorineural hearing loss requiring cochlear implants in older adults 32. Mouse models confirm that Homer2 deletion causes early-onset rapidly progressive hearing loss 1. Beyond auditory function, HOMER2 interacts with amyloid precursor protein and inhibits AΞ² peptide production, suggesting a potential protective role against Alzheimer's disease pathology 4. The protein also shows elevated expression in certain cancers, where it may serve as a prognostic marker 5. HOMER2 variants are increasingly recognized as causes of auditory neuropathy spectrum disorders through genetic screening approaches 6.

Sources cited
1
HOMER2 is essential for normal hearing, localizes to stereocilia, and mouse deletion causes hearing loss
PMID: 25816005
2
Coiled-coil domain is essential for multimerization and CDC42 interaction in hearing function
PMID: 30047143
3
Frameshift variants cause progressive sensorineural hearing loss in older adults
PMID: 40515814
4
HOMER2 interacts with amyloid precursor protein and inhibits AΞ² peptide production
PMID: 18387811
5
HOMER2 shows elevated expression in certain cancers as prognostic marker
PMID: 29891190
6
HOMER2 variants cause auditory neuropathy spectrum disorders
PMID: 39684270
Disease Associationsβ“˜21
autosomal dominant nonsyndromic hearing lossOpen Targets
0.60Moderate
deafnessOpen Targets
0.54Moderate
ovarian dysfunctionOpen Targets
0.25Weak
preeclampsiaOpen Targets
0.25Weak
sarcoidosisOpen Targets
0.24Weak
genetic disorderOpen Targets
0.19Weak
Non-syndromic genetic deafnessOpen Targets
0.18Weak
nonsyndromic genetic hearing lossOpen Targets
0.18Weak
biliary tract diseaseOpen Targets
0.17Weak
morbid obesityOpen Targets
0.15Weak
bipolar disorderOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.07Suggestive
Familial progressive cardiac conduction defectOpen Targets
0.07Suggestive
Brugada syndromeOpen Targets
0.07Suggestive
Romano-Ward syndromeOpen Targets
0.07Suggestive
familial atrial fibrillationOpen Targets
0.06Suggestive
flatfootOpen Targets
0.06Suggestive
hypertrophic cardiomyopathyOpen Targets
0.06Suggestive
Familial short QT syndromeOpen Targets
0.06Suggestive
Rare familial disorder with hypertrophic cardiomyopathyOpen Targets
0.06Suggestive
Deafness, autosomal dominant, 68UniProt
Pathogenic Variants5
NM_004839.4(HOMER2):c.1023_1029del (p.Asp342fs)Likely pathogenic
Autosomal dominant nonsyndromic hearing loss 68
β˜…β˜†β˜†β˜†2025β†’ Residue 342
NM_004839.4(HOMER2):c.1031A>G (p.Ter344Trp)Likely pathogenic
Autosomal dominant nonsyndromic hearing loss 68
β˜…β˜†β˜†β˜†β†’ Residue 344
NM_004839.4(HOMER2):c.799_803del (p.Pro267fs)Pathogenic
Autosomal dominant nonsyndromic hearing loss 68
β˜†β˜†β˜†β˜†2021β†’ Residue 267
NM_004839.4(HOMER2):c.807dup (p.Met270fs)Pathogenic
Autosomal dominant nonsyndromic hearing loss 68
β˜†β˜†β˜†β˜†2020β†’ Residue 270
NM_004839.4(HOMER2):c.554G>C (p.Arg185Pro)Pathogenic
Autosomal dominant nonsyndromic hearing loss 68
β˜†β˜†β˜†β˜†2015β†’ Residue 185
View on ClinVar β†—
Related Genes
GRM1Protein interaction99%GRM5Protein interaction99%DLGAP1Protein interaction99%SHANK1Protein interaction90%HOMER3Protein interaction89%ITPR1Protein interaction87%
Tissue Expression6 tissues
Liver
100%
Heart
77%
Brain
28%
Bone Marrow
13%
Ovary
12%
Lung
11%
Gene Interaction Network
Click a node to explore
HOMER2GRM1GRM5DLGAP1SHANK1HOMER3ITPR1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q9NSB8
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.92LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.65 [0.47–0.92]
RankingsWhere HOMER2 stands among ~20K protein-coding genes
  • #8,687of 20,598
    Most Researched51
  • #3,581of 5,498
    Most Pathogenic Variants5
  • #8,463of 17,882
    Most Constrained (LOEUF)0.92
Genes detectedHOMER2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Impact of HOMER2 frameshift extension variant on auditory function and development.
PMID: 40515814
J Mol Med (Berl) Β· 2025
1.00
2
Heterogeneous Group of Genetically Determined Auditory Neuropathy Spectrum Disorders.
PMID: 39684270
Int J Mol Sci Β· 2024
0.90
3
Homer2 and Homer3 interact with amyloid precursor protein and inhibit Abeta production.
PMID: 18387811
Neurobiol Dis Β· 2008
0.80
4
Whole exome sequencing identified a second pathogenic variant in HOMER2 for autosomal dominant non-syndromic deafness.
PMID: 30047143
Clin Genet Β· 2018
0.70
5
Homer proteins in Ca²⁺ entry.
PMID: 23554128
IUBMB Life Β· 2013
0.60