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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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HOXA5
homeobox A5
Chromosome 7 · 7p15.2
NCBI Gene: 3202Ensembl: ENSG00000106004.5HGNC: HGNC:5106UniProt: P20719
124PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of myeloid cell differentiationnegative regulation of erythrocyte differentiationpositive regulation of transcription by RNA polymerase IIDNA bindingendometriosisneoplasmOvarian Endometriosisbreast cancer
✦AI Summary

HOXA5 is a sequence-specific transcription factor that functions as a developmental regulator specifying anterior-posterior cellular identity 1. Beyond embryonic development, HOXA5 plays critical roles in hematopoietic stem cell specification and multiple disease contexts. It is a master transcription factor sufficient to convert hemogenic endothelium into functional hematopoietic stem and progenitor cells capable of multi-lineage engraftment 12. In adipose tissue, HOXA5 promotes anti-inflammatory M2 macrophage polarization and regulates adipocyte function and tissue remodeling, with DNA methylation-based downregulation of HOXA5 associated with hypertrophic obesity and type 2 diabetes risk 34. HOXA5 upregulation impairs airway epithelial differentiation; nylon microplastic fiber exposure upregulates HOXA5 and inhibits developing airway organoid formation, and HOXA5 inhibition restores this capacity 5. In cardiac pathology, HINT1 attenuates cardiac hypertrophy by suppressing HOXA5 expression via the MEK/ERK/YY1 pathway, implicating HOXA5 in TGF-β-mediated hypertrophic responses 6. HOXA5 serves as a fibroblast-specific transcriptional motif in intrahepatic cholangiocarcinoma, participating in cancer-associated fibroblast-tumor cell interactions 7. Prenatal maternal asthma exposure associates with altered HOXA5 DNA methylation in newborn blood, suggesting epigenetic mechanisms linking maternal asthma to offspring lung disease susceptibility 8.

Sources cited
1
HOXA5 is one of seven transcription factors sufficient to convert hemogenic endothelium into functional hematopoietic stem and progenitor cells with multi-lineage engraftment capacity
PMID: 28514439
2
hPSC-derived hematopoietic progenitors express hallmark HSC transcription factors including HOXA5 and can be enriched to >90% pure HLF+ HOXA+ progenitors
PMID: 38569552
3
Nylon microplastic fiber exposure upregulates Hoxa5 expression and inhibits developing airway organoid formation; Hoxa5 inhibition during nylon exposure restores airway organoid formation capacity
PMID: 37971785
4
HOXA5 is a transcriptional factor that promotes macrophage anti-inflammatory M2 polarization in adipose tissue
PMID: 37153549
5
HOXA5 regulates adipocyte function and adipose tissue remodeling; DNA methylation at HOXA5 is associated with hypertrophic obesity and increased type 2 diabetes risk
PMID: 37626900
6
HINT1 attenuates cardiac hypertrophy by suppressing HOXA5 expression via inhibition of PKCβ1 and the MEK/ERK/YY1 pathway; HOXA5 affects hypertrophy through TGF-β signaling
PMID: 34098726
7
HOXA5 is identified as a fibroblast-specific transcriptional motif in intrahepatic cholangiocarcinoma participating in cancer-associated fibroblast-tumor cell interactions
PMID: 38702814
8
Maternal asthma during pregnancy is associated with alterations in newborn blood DNA methylation at sites including HOXA5, which is implicated in asthma and lung function
PMID: 40349045
Disease Associationsⓘ20
endometriosisOpen Targets
0.16Weak
neoplasmOpen Targets
0.10Weak
Ovarian EndometriosisOpen Targets
0.10Weak
breast cancerOpen Targets
0.10Weak
non-small cell lung carcinomaOpen Targets
0.10Suggestive
acute myeloid leukemiaOpen Targets
0.09Suggestive
osteosarcomaOpen Targets
0.09Suggestive
gliomaOpen Targets
0.09Suggestive
cancerOpen Targets
0.09Suggestive
oral squamous cell carcinomaOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
adrenal cortex carcinomaOpen Targets
0.08Suggestive
lung adenocarcinomaOpen Targets
0.08Suggestive
lung cancerOpen Targets
0.08Suggestive
cervical cancerOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
glioblastomaOpen Targets
0.08Suggestive
posterior cortical atrophyOpen Targets
0.07Suggestive
rheumatoid arthritisOpen Targets
0.07Suggestive
primary ciliary dyskinesiaOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
HOXA6Protein interaction97%HOXA7Protein interaction96%HOXB7Protein interaction96%HOXD4Protein interaction94%HOXB5Protein interaction91%HOXB6Protein interaction91%
Tissue Expression6 tissues
Lung
100%
Brain
41%
Bone Marrow
12%
Ovary
5%
Liver
2%
Heart
0%
Gene Interaction Network
Click a node to explore
HOXA5HOXA6HOXA7HOXB7HOXD4HOXB5HOXB6
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P20719
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.00LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.61 [0.39–1.00]
RankingsWhere HOXA5 stands among ~20K protein-coding genes
  • #3,795of 20,598
    Most Researched124 · top quartile
  • #9,593of 17,882
    Most Constrained (LOEUF)1.00
Genes detectedHOXA5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Inhalable Textile Microplastic Fibers Impair Airway Epithelial Differentiation.
PMID: 37971785
Am J Respir Crit Care Med · 2024
1.00
2
Haematopoietic stem and progenitor cells from human pluripotent stem cells.
PMID: 28514439
Nature · 2017
0.90
3
Adipose tissue macrophages as potential targets for obesity and metabolic diseases.
PMID: 37153549
Front Immunol · 2023
0.80
4
Lineage-tracing hematopoietic stem cell origins in vivo to efficiently make human HLF+ HOXA+ hematopoietic progenitors from pluripotent stem cells.
PMID: 38569552
Dev Cell · 2024
0.70
5
HINT1 (Histidine Triad Nucleotide-Binding Protein 1) Attenuates Cardiac Hypertrophy Via Suppressing HOXA5 (Homeobox A5) Expression.
PMID: 34098726
Circulation · 2021
0.60