HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
HOXB9
homeobox B9
Chromosome 17 · 17q21.32
NCBI Gene: 3219Ensembl: ENSG00000170689.10HGNC: HGNC:5120UniProt: B3KPJ1
105PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cell chemotaxisnucleoplasmprotein bindingsequence-specific double-stranded DNA bindingneurodegenerative diseaselysosomal storage diseaseParkinson diseasemultiple sclerosis
✦AI Summary

HOXB9 (homeobox B9) is a sequence-specific transcription factor that plays diverse roles in cancer biology, with context-dependent tumor suppressor and oncogenic functions. In lung adenocarcinoma, HOXB9 promotes metastasis through WNT-dependent signaling and upregulates KRAS expression, with higher levels associated with poor prognosis 12. The protein's stability is regulated by AMPK-mediated phosphorylation at T133, which promotes Praja2-mediated degradation 2. Conversely, in pancreatic cancer, HOXB9 functions as a tumor suppressor by blocking cell cycle progression through upregulating RBL2 and inhibiting c-Myc, with DNMT1-mediated promoter methylation reducing its expression 3. In endometrial cancer, oleic acid stabilizes HOXB9 by preventing its degradation, leading to ODC1 stabilization and polyamine accumulation that promotes tumor growth 4. HOXB9 also regulates ferroptosis through transcriptional control of SLC7A11, with cold atmospheric plasma enhancing PCAF-mediated HOXB9 acetylation and subsequent protein degradation 5. Additionally, HOXB9 expression is lost during renal medullary carcinoma transformation, contributing to ferroptosis resistance 6. These findings highlight HOXB9's complex regulatory mechanisms and its potential as both a therapeutic target and prognostic marker across multiple cancer types.

Sources cited
1
HOXB9 promotes metastasis in lung adenocarcinoma through WNT-dependent signaling
PMID: 26544896
2
AMPK mediates HOXB9 phosphorylation and degradation, regulating KRAS expression in lung cancer
PMID: 36001969
3
HOXB9 functions as tumor suppressor in pancreatic cancer by blocking cell cycle and inhibiting c-Myc
PMID: 35182659
4
Oleic acid stabilizes HOXB9 leading to ODC1 stabilization and polyamine accumulation in endometrial cancer
PMID: 41402312
5
HOXB9 transcriptionally regulates SLC7A11 and ferroptosis, with stability controlled by PCAF-mediated acetylation
PMID: 39127016
6
HOXB9 expression is lost during renal medullary carcinoma transformation contributing to ferroptosis resistance
PMID: 37236926
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.54Moderate
Alzheimer diseaseOpen Targets
0.28Weak
lysosomal storage diseaseOpen Targets
0.28Weak
multiple sclerosisOpen Targets
0.28Weak
Parkinson diseaseOpen Targets
0.28Weak
movement disorderOpen Targets
0.27Weak
restless legs syndromeOpen Targets
0.25Weak
hypertensionOpen Targets
0.17Weak
cardiovascular diseaseOpen Targets
0.14Weak
Abnormality of the skeletal systemOpen Targets
0.13Weak
neoplasmOpen Targets
0.11Weak
hepatocellular carcinomaOpen Targets
0.10Suggestive
non-small cell lung carcinomaOpen Targets
0.09Suggestive
head and neck squamous cell carcinomaOpen Targets
0.09Suggestive
cancerOpen Targets
0.09Suggestive
lung cancerOpen Targets
0.09Suggestive
lung adenocarcinomaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
Increased blood pressureOpen Targets
0.08Suggestive
posterior cortical atrophyOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
BTG2Protein interaction91%HOXB5Protein interaction89%HOXB6Protein interaction89%HOXB8Protein interaction89%HOXD9Shared pathway80%HOXB3Protein interaction68%
Tissue Expression6 tissues
Brain
100%
Ovary
2%
Lung
2%
Liver
1%
Bone Marrow
0%
Heart
0%
Gene Interaction Network
Click a node to explore
HOXB9BTG2HOXB5HOXB6HOXB8HOXD9HOXB3
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P17482
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.96LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.57 [0.35–0.96]
RankingsWhere HOXB9 stands among ~20K protein-coding genes
  • #4,528of 20,598
    Most Researched105 · top quartile
  • #9,074of 17,882
    Most Constrained (LOEUF)0.96
Genes detectedHOXB9
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Single-Cell RNA Sequencing Identifies MMP11
PMID: 40552583
Adv Sci (Weinh) · 2025
1.00
2
GalNAc-T14 promotes metastasis through Wnt dependent HOXB9 expression in lung adenocarcinoma.
PMID: 26544896
Oncotarget · 2015
0.90
3
Metabolic syndrome promotes endometrial cancer by Oleic acid-mediated polyamine accumulation.
PMID: 41402312
Nat Commun · 2025
0.80
4
HOXA9 versus HOXB9; particular focus on their controversial role in tumor pathogenesis.
PMID: 38753266
J Appl Genet · 2024
0.70
5
The AMPK-HOXB9-KRAS axis regulates lung adenocarcinoma growth in response to cellular energy alterations.
PMID: 36001969
Cell Rep · 2022
0.60