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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
IRF2BPL
interferon regulatory factor 2 binding protein like
Chromosome 14 Β· 14q24.3
NCBI Gene: 64207Ensembl: ENSG00000119669.5HGNC: HGNC:14282UniProt: Q9H1B7
68PubMed Papers
21Diseases
0Drugs
95Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
ubiquitin protein ligase activitynucleoplasmnegative regulation of transcription by RNA polymerase IInervous system developmentneurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizuresgenetic disorderNeurodevelopmental disorderneurodegenerative disease
✦AI Summary

IRF2BPL is a nuclear transcriptional regulator that functions as an E3 ubiquitin ligase mediating proteasome-dependent protein degradation 1. It negatively regulates Wnt signaling through CTNNB1 degradation downstream of FOXF2 1 and may regulate genes controlling female reproductive function. The protein contains two zinc-finger domains and a C3HC4 RING domain characteristic of ubiquitin ligases 2. Pathogenic variants in IRF2BPL cause neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures (NEDAMSS) 3. Disease mechanisms involve heterozygous truncations that sequester wild-type protein to the cytoplasm and trigger aggregation, leading to mitochondrial dysfunction and neuronal death in astrocytes 4. IRF2BPL mutations present highly heterogeneous phenotypes ranging from developmental delay to severe neurodegenerative disease with progressive myoclonus epilepsies, infantile spasms, and drug-resistant epilepsy 56. Missense and in-frame indel variants particularly associate with seizures and developmental delay 2. Recent exome studies identified IRF2BPL as a novel genetic risk locus for depressive symptoms, suggesting broader neuropsychiatric relevance 7. Outside the nervous system, IRF2BPL suppresses osteosarcoma progression by degrading FOSL2 and inhibiting PI3K/AKT signaling 8. Treatment with copper chelator CuATSM shows promise in rescuing neuronal survival and restoring mitochondrial function in patient-derived cells and animal models 49.

Sources cited
1
IRF2BPL is a nuclear transcriptional regulator that functions as an E3 ubiquitin ligase mediating proteasome-dependent protein degradation .
PMID: 29374064
2
The protein contains two zinc-finger domains and a C3HC4 RING domain characteristic of ubiquitin ligases .
PMID: 39843638
3
Pathogenic variants in IRF2BPL cause neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures (NEDAMSS) .
PMID: 38903604
4
Disease mechanisms involve heterozygous truncations that sequester wild-type protein to the cytoplasm and trigger aggregation, leading to mitochondrial dysfunction and neuronal death in astrocytes .
PMID: 36476864
5
Recent exome studies identified IRF2BPL as a novel genetic risk locus for depressive symptoms, suggesting broader neuropsychiatric relevance .
PMID: 39472661
6
Outside the nervous system, IRF2BPL suppresses osteosarcoma progression by degrading FOSL2 and inhibiting PI3K/AKT signaling .
PMID: 40834975
Disease Associationsβ“˜21
neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizuresOpen Targets
0.82Strong
genetic disorderOpen Targets
0.53Moderate
Neurodevelopmental disorderOpen Targets
0.44Moderate
neurodegenerative diseaseOpen Targets
0.37Weak
autism spectrum disorderOpen Targets
0.36Weak
Intellectual disabilityOpen Targets
0.34Weak
SeizureOpen Targets
0.34Weak
Abnormality of the skeletal systemOpen Targets
0.30Weak
smoking initiationOpen Targets
0.27Weak
Global developmental delayOpen Targets
0.27Weak
Spastic paraplegiaOpen Targets
0.27Weak
congestive heart failureOpen Targets
0.22Weak
obesityOpen Targets
0.21Weak
substance abuseOpen Targets
0.21Weak
attention deficit hyperactivity disorderOpen Targets
0.20Weak
breast cancerOpen Targets
0.19Weak
alopecia areataOpen Targets
0.18Weak
Neurodevelopmental abnormalityOpen Targets
0.11Weak
Rare genetic intellectual disabilityOpen Targets
0.11Weak
atrial fibrillationOpen Targets
0.10Suggestive
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizuresUniProt
Pathogenic Variants95
NM_024496.4(IRF2BPL):c.358C>T (p.Gln120Ter)Pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2025β†’ Residue 120
NM_024496.4(IRF2BPL):c.2137del (p.Leu713fs)Pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2025β†’ Residue 713
NM_024496.4(IRF2BPL):c.1250dup (p.Leu417fs)Pathogenic
not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 417
NM_024496.4(IRF2BPL):c.2044C>T (p.Gln682Ter)Pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2025β†’ Residue 682
NM_024496.4(IRF2BPL):c.355C>T (p.Gln119Ter)Likely pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 119
NM_024496.4(IRF2BPL):c.2236_2237del (p.Ser746fs)Likely pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2025β†’ Residue 746
NM_024496.4(IRF2BPL):c.499C>T (p.Gln167Ter)Pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures|IRF2BPL-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 167
NM_024496.4(IRF2BPL):c.562C>T (p.Arg188Ter)Pathogenic
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures|IRF2BPL-related disorder|Inborn genetic diseases|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 188
NM_024496.4(IRF2BPL):c.1489C>T (p.Gln497Ter)Pathogenic
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures|IRF2BPL-related disorder
β˜…β˜…β˜†β˜†2024β†’ Residue 497
NM_024496.4(IRF2BPL):c.1436C>T (p.Pro479Leu)Pathogenic
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 479
NM_024496.4(IRF2BPL):c.496G>T (p.Glu166Ter)Pathogenic
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2023β†’ Residue 166
NM_024496.4(IRF2BPL):c.2102del (p.Asn701fs)Pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2023β†’ Residue 701
NM_024496.4(IRF2BPL):c.349C>T (p.Gln117Ter)Likely pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2023β†’ Residue 117
NM_024496.4(IRF2BPL):c.1693C>T (p.Gln565Ter)Pathogenic
not provided|Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜…β˜†β˜†2022β†’ Residue 565
NM_024496.4(IRF2BPL):c.2122del (p.Ala708fs)Pathogenic
IRF2BPL-related disorder|not provided
β˜…β˜…β˜†β˜†2022β†’ Residue 708
NM_024496.4(IRF2BPL):c.514G>T (p.Glu172Ter)Pathogenic
IRF2BPL-related disorder|not provided
β˜…β˜…β˜†β˜†2020β†’ Residue 172
NM_024496.4(IRF2BPL):c.1181del (p.Lys394fs)Likely pathogenic
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜†β˜†β˜†2025β†’ Residue 394
NM_024496.4(IRF2BPL):c.1450TTC[1] (p.Phe485del)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 485
NM_024496.4(IRF2BPL):c.1787del (p.Pro596fs)Pathogenic
Neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures
β˜…β˜†β˜†β˜†2025β†’ Residue 596
NM_024496.4(IRF2BPL):c.2329C>T (p.Gln777Ter)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 777
View on ClinVar β†—
Related Genes
CNTNAP3BShared pathway100%BARHL2Shared pathway100%OTOGShared pathway100%LNX2Shared pathway100%MDGA2Shared pathway100%MAMDC4Shared pathway100%
Tissue Expression6 tissues
Ovary
100%
Brain
88%
Lung
74%
Liver
57%
Heart
34%
Bone Marrow
18%
Gene Interaction Network
Click a node to explore
IRF2BPLCNTNAP3BBARHL2OTOGLNX2MDGA2MAMDC4
PROTEIN STRUCTURE
Preparing viewer…
PDB2CS3 Β· NMR
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.54Moderately Constrained
pLIβ“˜
0.91Intolerant
Observed/Expected LoF0.34 [0.22–0.54]
RankingsWhere IRF2BPL stands among ~20K protein-coding genes
  • #6,906of 20,598
    Most Researched68
  • #813of 5,498
    Most Pathogenic Variants95 Β· top quartile
  • #3,456of 17,882
    Most Constrained (LOEUF)0.54 Β· top quartile
Genes detectedIRF2BPL
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Novel human neurodevelopmental and neurodegenerative disease associated with IRF2BPL gene variants-mechanisms and therapeutic avenues.
PMID: 38903604
Front Neurosci Β· 2024
1.00
2
Mechanisms of IRF2BPL-related disorders and identification of a potential therapeutic strategy.
PMID: 36476864
Cell Rep Β· 2022
0.90
3
Clinical and genetic spectrum of patients with IRF2BPL syndrome.
PMID: 39843638
J Hum Genet Β· 2025
0.80
4
IRF2BPL gene mutation: Expanding on neurologic phenotypes.
PMID: 31432588
Am J Med Genet A Β· 2019
0.70
5
Whole exome sequencing identified six novel genes for depressive symptoms.
PMID: 39472661
Mol Psychiatry Β· 2025
0.60