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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ISG20L2
interferon stimulated exonuclease gene 20 like 2
Chromosome 1 · 1q23.1
NCBI Gene: 81875Ensembl: ENSG00000143319.19HGNC: HGNC:25745UniProt: Q9H9L3
48PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingRNA processingnucleuslung adenocarcinomaMiyoshi myopathybreast cancerovarian dysfunction
✦AI Summary

ISG20L2 is a 3'-5' exoribonuclease with dual roles in ribosome biogenesis and immune regulation. Structurally, it contains an N-terminal nucleolar localization domain and a C-terminal catalytic exoribonuclease domain 1. In ribosome biogenesis, ISG20L2 is critical for processing precursor rRNAs, including 12S pre-rRNA maturation 1 and removal of the 3' external transcribed spacer during 18S and 28S rRNA maturation 2. Recently, ISG20L2 was identified as an RNA nuclease in activated T cells with preferential affinity for uridylated miRNA substrates, regulating expression of immunoregulatory molecules including PD-1, PD-L1, CTLA-4, and others 3. Clinically, ISG20L2 has significant disease relevance across multiple cancers. In multiple myeloma, ISG20L2 suppresses bortezomib sensitivity by competing with proteasome subunit PSMB5 for bortezomib binding, with ISG20L2 high expression correlating with treatment resistance 4. In hepatocellular carcinoma, elevated ISG20L2 expression is part of immune-related prognostic signatures associated with poor survival and represents an independent prognostic factor 56. Conversely, in breast cancer, ISG20L2 is identified as a hub gene upregulated in tumors with potential diagnostic and prognostic biomarker utility 7. In HCC, high miR-139-3p targeting ISG20L2 predicts better prognosis 8, suggesting ISG20L2 suppression may improve outcomes in specific contexts.

Sources cited
1
ISG20L2 is a 3'-5' exoribonuclease with N-terminal nucleolar localization domain and C-terminal catalytic activity involved in 5.8S and 12S rRNA maturation
PMID: 18065403
2
ISG20L2 is critical for removal of 3' external transcribed spacer and maturation of 18S and 28S ribosomal RNA 3' ends
PMID: 41261865
3
ISG20L2 is upregulated in activated T cells and regulates expression of immunoregulatory molecules including PD-1, PD-L1, CTLA-4, and others
PMID: 37646974
4
ISG20L2 suppresses bortezomib sensitivity in multiple myeloma by competing with PSMB5 for bortezomib binding, with high ISG20L2 expression predicting treatment resistance
PMID: 36040812
5
ISG20L2 is part of immune-related gene prognostic signature for hepatocellular carcinoma predicting overall survival
PMID: 34745496
6
ISG20L2 is an immune-related gene in HCC prognostic index reflecting immune cell infiltration levels
PMID: 32853412
7
ISG20L2 is a hub gene upregulated in breast cancer tissues with potential diagnostic and prognostic biomarker value
PMID: 34341433
8
ISG20L2 is a miR-139-3p target gene negatively correlated with miR-139-3p expression and related to hepatocellular carcinoma prognosis
PMID: 30394818
Disease Associationsⓘ20
lung adenocarcinomaOpen Targets
0.08Suggestive
Miyoshi myopathyOpen Targets
0.07Suggestive
breast cancerOpen Targets
0.05Suggestive
ovarian dysfunctionOpen Targets
0.05Suggestive
placenta praeviaOpen Targets
0.04Suggestive
prostate carcinomaOpen Targets
0.03Suggestive
adolescent idiopathic scoliosisOpen Targets
0.03Suggestive
colon adenocarcinomaOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
Invasive Breast CarcinomaOpen Targets
0.01Suggestive
ulcerative colitisOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.01Suggestive
lymph node metastatic carcinomaOpen Targets
0.01Suggestive
lung cancerOpen Targets
0.01Suggestive
triple-negative breast cancerOpen Targets
0.01Suggestive
juvenile dermatomyositisOpen Targets
0.01Suggestive
psoriasisOpen Targets
0.00Suggestive
infectionOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
AENShared pathway50%RMP24Shared pathway50%TRMT2BShared pathway50%SUGP1Shared pathway50%TRMT2AShared pathway50%U2SURPShared pathway50%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
64%
Liver
60%
Ovary
60%
Lung
54%
Heart
41%
Gene Interaction Network
Click a node to explore
ISG20L2AENRMP24TRMT2BSUGP1TRMT2AU2SURP
PROTEIN STRUCTURE
Preparing viewer…
PDB7YW5 · 2.77 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.75LoF Tolerant
pLIⓘ
0.04Tolerant
Observed/Expected LoF0.48 [0.32–0.75]
RankingsWhere ISG20L2 stands among ~20K protein-coding genes
  • #9,088of 20,598
    Most Researched48
  • #5,902of 17,882
    Most Constrained (LOEUF)0.75
Genes detectedISG20L2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
ISG20L2 suppresses bortezomib antimyeloma activity by attenuating bortezomib binding to PSMB5.
PMID: 36040812
JCI Insight · 2022
1.00
2
CENPL, ISG20L2, LSM4, MRPL3 are four novel hub genes and may serve as diagnostic and prognostic markers in breast cancer.
PMID: 34341433
Sci Rep · 2021
0.90
3
Immunogenomic Landscape Analysis of Prognostic Immune-Related Genes in Hepatocellular Carcinoma.
PMID: 34745496
J Healthc Eng · 2021
0.80
4
High miR-139-3p expression predicts a better prognosis for hepatocellular carcinoma: a pooled analysis.
PMID: 30394818
J Int Med Res · 2019
0.70
5
ISG20L2: an RNA nuclease regulating T cell activation.
PMID: 37646974
Cell Mol Life Sci · 2023
0.60