HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
15 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
U2SURP
U2 snRNP associated SURP domain containing
Chromosome 3 · 3q23
NCBI Gene: 23350Ensembl: ENSG00000163714.19HGNC: HGNC:30855UniProt: O15042
176PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleusnucleoplasmprotein bindingRNA bindingdengue diseasejoint diseasealcohol drinkingHypercholesterolemia
✦AI Summary

U2SURP (U2 snRNP associated SURP domain containing) is a serine/arginine-rich spliceosomal protein that functions as a regulator of alternative splicing and gene expression. As a component of the spliceosome, U2SURP interacts with other spliceosomal factors RBM17 and CHERP to reciprocally regulate their stability and control alternative splicing of RNA-processing protein transcripts 1. U2SURP contains RNA-binding domains and localizes to the nucleus and nucleoplasm, enabling its role in pre-mRNA processing 2. In cancer contexts, U2SURP is significantly upregulated and promotes tumorigenesis across multiple cancer types. In triple-negative breast cancer, MYC-driven U2SURP regulates SAT1 alternative splicing to enhance cell proliferation and metastasis 3. In pancreatic cancer, U2SURP is recruited by lncRNA HNF1A-AS1 to promote CD44 alternative splicing, facilitating invasion and metastasis 4. U2SURP expression correlates with poor survival outcomes in melanoma, breast cancer, and esophageal carcinoma, and associates with reduced immune cell infiltration and checkpoint molecule expression [PMID:40108329; 5; 60]. Functionally, silencing U2SURP suppresses cancer cell proliferation, migration, and invasion while showing minimal effects on normal epithelial cells 3. These findings establish U2SURP as a cancer-associated splicing regulator and potential therapeutic target.

Sources cited
1
U2SURP is a serine/arginine-rich splicing factor; its expression negatively correlates with immune infiltration and checkpoint markers in melanoma; silencing U2SURP reduces cell survival, proliferation, and migration
PMID: 40108329
2
U2SURP interacts with RBM17 and CHERP spliceosomal factors; they reciprocally regulate each other's stability and control alternative splicing of RNA-processing factor transcripts
PMID: 30332651
3
U2SURP is a spliceosome component significantly associated with breast cancer survival; its expression correlates with tumor stage, grade, and molecular subtype; inhibiting U2SURP suppresses cell colony formation and growth
PMID: 32965163
4
U2SURP is a lactylation-related prognostic gene in esophageal carcinoma; knockdown inhibits lactylation levels, immune genes IL-1A/IL-1B, proliferation, migration and invasion
PMID: 39900790
5
MYC enhances U2SURP translation in triple-negative breast cancer; U2SURP regulates SAT1 alternative splicing to promote tumorigenesis and metastasis; it shows minimal effects on normal mammary epithelial cells
PMID: 36907504
6
U2SURP is recruited by lncRNA HNF1A-AS1 to regulate CD44 alternative splicing, promoting pancreatic cancer invasion and metastasis
PMID: 40518456
Disease Associationsⓘ20
dengue diseaseOpen Targets
0.37Weak
joint diseaseOpen Targets
0.32Weak
alcohol drinkingOpen Targets
0.29Weak
HypercholesterolemiaOpen Targets
0.28Weak
smoking initiationOpen Targets
0.27Weak
neurodegenerative diseaseOpen Targets
0.26Weak
primary familial polycythemia due to EPO receptor mutationOpen Targets
0.05Suggestive
hemolytic anemia due to diphosphoglycerate mutase deficiencyOpen Targets
0.05Suggestive
erythrocytosis, familial, 3Open Targets
0.04Suggestive
erythrocytosis, familial, 6Open Targets
0.04Suggestive
erythrocytosis, familial, 4Open Targets
0.04Suggestive
Pyruvate kinase hyperactivityOpen Targets
0.04Suggestive
X-linked sideroblastic anemia 1Open Targets
0.04Suggestive
polycythemia veraOpen Targets
0.03Suggestive
hemolytic anemia due to erythrocyte adenosine deaminase overproductionOpen Targets
0.03Suggestive
ghosal hematodiaphyseal dysplasiaOpen Targets
0.03Suggestive
overhydrated hereditary stomatocytosisOpen Targets
0.03Suggestive
orthostatic hypotensionOpen Targets
0.03Suggestive
dehydrated hereditary stomatocytosisOpen Targets
0.03Suggestive
triple-negative breast cancerOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RBMS2Shared pathway100%RTCAShared pathway100%ZRANB2Shared pathway100%SUGP2Shared pathway100%RMP24Shared pathway100%TRMT2BShared pathway100%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
43%
Heart
27%
Lung
24%
Brain
22%
Liver
22%
Gene Interaction Network
Click a node to explore
U2SURPRBMS2RTCAZRANB2SUGP2RMP24TRMT2B
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt O15042
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.07Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.02 [0.01–0.07]
RankingsWhere U2SURP stands among ~20K protein-coding genes
  • #2,494of 20,598
    Most Researched176 · top quartile
  • #17of 17,882
    Most Constrained (LOEUF)0.07 · top 1%
Genes detectedU2SURP
Sources retrieved15 papers
Response time—
📄 Sources
15▼
1
Comprehensive systems biology analysis reveals splicing factor contributions to cutaneous melanoma progression.
PMID: 40108329
Sci Rep · 2025
1.00
2
RBM17 Interacts with U2SURP and CHERP to Regulate Expression and Splicing of RNA-Processing Proteins.
PMID: 30332651
Cell Rep · 2018
0.90
3
Identification of spliceosome components pivotal to breast cancer survival.
PMID: 32965163
RNA Biol · 2021
0.80
4
The plasma peptides of sepsis.
PMID: 32636717
Clin Proteomics · 2020
0.70
5
Integrative bioinformatics and experimental analyses identify U2SURP as a novel lactylation-related prognostic signature in esophageal carcinoma.
PMID: 39900790
Immunol Res · 2025
0.60