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25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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KAT2A
lysine acetyltransferase 2A
Chromosome 17 · 17q21.2
NCBI Gene: 2648Ensembl: ENSG00000108773.12HGNC: HGNC:4201UniProt: Q92830
233PubMed Papers
20Diseases
0Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
regulation of protein stabilityoxoglutarate dehydrogenase complexchromatin bindingtranscription coactivator activitycancerneuroinflammatory disorderneurodegenerative diseasepsoriasis
✦AI Summary

KAT2A (lysine acetyltransferase 2A) is a versatile chr17-modifying enzyme that functions as both a histone acetyltransferase and succinyltransferase/lactyltransferase, playing critical roles in gene regulation and cellular metabolism. As a histone acetyltransferase, KAT2A acetylates histone H3, particularly at lysine 9, to regulate transcription 1. Beyond acetylation, KAT2A exhibits dual enzymatic activities: it functions as a succinyltransferase when coupled with the α-ketoglutarate dehydrogenase complex, succinylating histone H3 at lysine 79 near transcription start sites to promote gene expression and tumor cell proliferation 2, and as a lactyltransferase when complexed with ACSS2, catalyzing histone lactylation that drives tumor immune evasion through Wnt/β-catenin, NF-κB, and PD-L1 expression 3. KAT2A is essential for intestinal stem cell maintenance, preventing double-stranded RNA accumulation and interferon signaling 4. In disease contexts, KAT2A represents a therapeutic target in acute myeloid leukemia, where its inhibition induces myeloid differentiation and apoptosis while sparing normal hematopoietic cells 5. The enzyme also contributes to breast cancer metastasis through interactions with methylated SNIP1 and c-MYC 6, and promotes macrophage polarization in septic lung injury via STAT1 succinylation 7.

Sources cited
1
KAT2A acts as histone acetyltransferase, particularly acetylating H3K9, and mediates citrate-dependent histone acetylation in T cell exhaustion
PMID: 39666821
2
KAT2A functions as succinyltransferase when coupled with α-KGDH complex, succinylating histone H3K79 to promote gene expression and tumor growth
PMID: 29211711
3
KAT2A acts as lactyltransferase when complexed with ACSS2, catalyzing histone lactylation that drives tumor immune evasion
PMID: 39561764
4
KAT2A is essential for intestinal stem cell maintenance and prevents interferon signaling
PMID: 39110797
5
KAT2A inhibition demonstrates anti-AML activity by inducing differentiation and apoptosis while sparing normal cells
PMID: 27760321
6
KAT2A interacts with methylated SNIP1 and c-MYC to promote breast cancer metastasis
PMID: 35449131
7
KAT2A promotes STAT1 succinylation leading to macrophage M1 polarization in septic lung injury
PMID: 40755420
Disease Associationsⓘ20
cancerOpen Targets
0.59Moderate
neuroinflammatory disorderOpen Targets
0.37Weak
neurodegenerative diseaseOpen Targets
0.34Weak
psoriasisOpen Targets
0.19Weak
acute myeloid leukemiaOpen Targets
0.17Weak
alcohol drinkingOpen Targets
0.16Weak
coronary artery diseaseOpen Targets
0.13Weak
neoplasmOpen Targets
0.10Weak
hepatocellular carcinomaOpen Targets
0.09Suggestive
lung adenocarcinomaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.09Suggestive
leukemiaOpen Targets
0.09Suggestive
coronary atherosclerosisOpen Targets
0.09Suggestive
gliomaOpen Targets
0.09Suggestive
glioblastoma multiformeOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
acute kidney injuryOpen Targets
0.08Suggestive
rheumatoid arthritisOpen Targets
0.08Suggestive
Burkitts lymphomaOpen Targets
0.08Suggestive
renal cell carcinomaOpen Targets
0.07Suggestive
Pathogenic Variants1
NM_021078.3(KAT2A):c.2032_2055del (p.Leu678_Gln685del)Likely pathogenic
See cases
★☆☆☆→ Residue 678
View on ClinVar ↗
Related Genes
TRRAPProtein interaction100%TAF9Protein interaction100%WDR5Protein interaction100%SUPT3HProtein interaction100%USP22Protein interaction100%TAF12Protein interaction100%
Tissue Expression6 tissues
Ovary
100%
Liver
65%
Bone Marrow
36%
Heart
31%
Lung
27%
Brain
6%
Gene Interaction Network
Click a node to explore
KAT2ATRRAPTAF9WDR5SUPT3HUSP22TAF12
PROTEIN STRUCTURE
Preparing viewer…
PDB6J3P · 1.60 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.59Moderately Constrained
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.45 [0.35–0.59]
RankingsWhere KAT2A stands among ~20K protein-coding genes
  • #1,713of 20,598
    Most Researched233 · top 10%
  • #4,706of 5,498
    Most Pathogenic Variants1
  • #3,961of 17,882
    Most Constrained (LOEUF)0.59 · top quartile
Genes detectedKAT2A
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
ACSS2 acts as a lactyl-CoA synthetase and couples KAT2A to function as a lactyltransferase for histone lactylation and tumor immune evasion.
PMID: 39561764
Cell Metab · 2025
1.00
2
Acetylation in the regulation of autophagy.
PMID: 35435793
Autophagy · 2023
0.90
3
Nutrient-driven histone code determines exhausted CD8
PMID: 39666821
Science · 2025
0.80
4
KAT2A coupled with the α-KGDH complex acts as a histone H3 succinyltransferase.
PMID: 29211711
Nature · 2017
0.70
5
Enterotoxigenic Bacteroidesfragilis Promotes Intestinal Inflammation and Malignancy by Inhibiting Exosome-Packaged miR-149-3p.
PMID: 34371001
Gastroenterology · 2021
0.68