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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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KLF13
KLF transcription factor 13
Chromosome 15 · 15q13.3
NCBI Gene: 51621Ensembl: ENSG00000169926.12HGNC: HGNC:13672UniProt: Q9Y2Y9
58PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
sequence-specific double-stranded DNA bindingprotein bindingchromatinRNA polymerase II cis-regulatory region sequence-specific DNA binding
✦AI Summary

KLF13 is a sequence-specific DNA-binding transcription factor that regulates gene expression through binding to GC-rich promoter elements 1. Beyond its canonical transcriptional roles, KLF13 functions as a multi-pathway regulator with significant disease implications. In cancer contexts, KLF13 promotes progression across multiple malignancies: in esophageal cancer, it enhances cell proliferation and migration by activating GPIHBP1 to regulate lipid metabolism 2; in lung adenocarcinoma, it suppresses GPX4 expression to promote ferroptosis and chemosensitivity 3; in gastric cancer, it activates the NF-κB pathway to enhance migration and invasion 4; and in breast cancer, it promotes aggressiveness through HTRA1 and Hedgehog signaling 5. KLF13 also plays critical roles in viral pathogenesis and cellular homeostasis: HPV E7 protein increases KLF13 expression to facilitate productive viral replication and cervical cancer development 6, while in skeletal muscle, KLF13 restrains the Dll4-Notch2 axis to prevent dexamethasone-induced atrophy 7. Epigenetically, KLF13 methylation correlates with childhood obesity and BMI-associated traits 8, and in rheumatoid arthritis synovial tissues, KLF13 functions as a key driver in B cell regulatory networks 9. These diverse functions position KLF13 as a pleiotropic transcriptional regulator with therapeutic potential across oncology, metabolic disease, and inflammatory disorders.

Sources cited
1
KLF13 represses transcription by interacting with corepressor Sin3A and HDAC1
PMID: 11477107
2
KLF13 promotes esophageal cancer progression by activating GPIHBP1 and regulating lipid metabolism
PMID: 40450000
3
KLF13 promotes ferroptosis in lung adenocarcinoma by inhibiting GPX4 transcription and enhances chemotherapy sensitivity
PMID: 40597044
4
KLF13 promotes gastric cancer cell migration and invasion through NF-κB pathway activation
PMID: 36580668
5
KLF13 promotes breast cancer progression through HTRA1 and Hedgehog signaling pathway
PMID: 40555914
6
HPV E7 protein increases KLF13 expression to promote viral genome amplification and cervical cancer development through STAT5 and IL-8
PMID: 27041562
7
KLF13 restrains the Dll4-Notch2 axis to prevent muscle atrophy; KLF13 agonist clofoctol protects against glucocorticoid-induced atrophy
PMID: 38973459
8
KLF13 gene methylation (cg07814318) associates with childhood obesity and BMI-related traits
PMID: 28508896
9
KLF13 functions as a key driver transcription factor in B cell regulatory networks in rheumatoid arthritis synovial tissues
PMID: 39161769
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SIN3AProtein interaction75%MTMR10Protein interaction73%ZBTB7CShared pathway33%GLIS3Shared pathway33%CCDC124Shared pathway33%ZNF768Shared pathway33%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
KLF13SIN3AMTMR10ZBTB7CGLIS3CCDC124ZNF768
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9Y2Y9
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.79LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.13 [0.69–1.79]
RankingsWhere KLF13 stands among ~20K protein-coding genes
  • #7,885of 20,598
    Most Researched58
  • #16,501of 17,882
    Most Constrained (LOEUF)1.79
Genes detectedKLF13
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
PMID: 21290787
1.00
2
KLF13 promotes esophageal cancer progression and regulates triacylglyceride and free fatty acid metabolism through GPIHBP1.
PMID: 40450000
Cell Death Dis · 2025
0.90
3
KLF13 regulates the differentiation-dependent human papillomavirus life cycle in keratinocytes through STAT5 and IL-8.
PMID: 27041562
Oncogene · 2016
0.80
4
KLF13 restrains Dll4-muscular Notch2 axis to improve the muscle atrophy.
PMID: 38973459
J Cachexia Sarcopenia Muscle · 2024
0.70
5
KLF13 promotes ferroptosis and chemosensitivity in lung adenocarcinoma.
PMID: 40597044
BMC Biol · 2025
0.60