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GeneE
2 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
LCE2C
late cornified envelope 2C
Chromosome 1 Β· 1q21.3
NCBI Gene: 353140Ensembl: ENSG00000187180.4HGNC: HGNC:29460UniProt: Q5TA81
8PubMed Papers
5Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingidentical protein bindingepidermis developmentAbnormality of the gastrointestinal tractocular hypotensionDown syndromeobstructive sleep apnea
✦AI Summary

Based on limited published evidence, LCE2C encodes a precursor of the cornified envelope in the stratum corneum, functioning through protein binding interactions. UniProt annotations indicate its role in late cornified envelope formation. LCE2C was identified as a potential head and neck squamous cell carcinoma biomarker with altered expression linked to decreased patient survival 1, and as a key cross-talk gene between periodontitis and hypothyroidism with high diagnostic accuracy 2. However, molecular mechanisms and tissue-specific functions require further investigation.

Sources cited
1
LCE2C identified as hub gene and potential HNSCC biomarker with differential expression and altered expression linked to decreased patient survival
PMID: 35142951
2
LCE2C identified as top cross-talk gene between periodontitis and hypothyroidism with high diagnostic accuracy (AUC >60-80%)
PMID: 35450027
⚠Limited data available β€” This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜5
Abnormality of the gastrointestinal tractOpen Targets
0.08Suggestive
ocular hypotensionOpen Targets
0.02Suggestive
Down syndromeOpen Targets
0.01Suggestive
obstructive sleep apneaOpen Targets
0.00Suggestive
keratoconusOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
KRTAP5-9Shared pathway100%GRHL1Shared pathway100%LCE7AShared pathway100%KPLCEShared pathway100%KRTDAPShared pathway100%LCE2DProtein interaction97%
Tissue Expression6 tissues
Lung
0%
Bone Marrow
0%
Ovary
0%
Heart
0%
Liver
0%
Brain
0%
Gene Interaction Network
Click a node to explore
LCE2CKRTAP5-9GRHL1LCE7AKPLCEKRTDAPLCE2D
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q5TA81
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.84LoF Tolerant
pLIβ“˜
0.34Tolerant
Observed/Expected LoF0.00 [0.00–1.84]
RankingsWhere LCE2C stands among ~20K protein-coding genes
  • #17,632of 20,598
    Most Researched8
  • #16,784of 17,882
    Most Constrained (LOEUF)1.84
Genes detectedLCE2C
Sources retrieved2 papers
Response timeβ€”
πŸ“„ Sources
2
1
Differential gene expression and network analysis in head and neck squamous cell carcinoma.
PMID: 35142951
Mol Cell Biochem Β· 2022
1.00
2
Transcriptomic Analysis Reveals Genetic Cross-Talk between Periodontitis and Hypothyroidism.
PMID: 35450027
Dis Markers Β· 2022
0.50