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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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LCE3E
late cornified envelope 3E
Chromosome 1 · 1q21.3
NCBI Gene: 353145Ensembl: ENSG00000185966.4HGNC: HGNC:29463UniProt: Q5T5B0
11PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingepidermis developmentpsoriasisatopic eczemaesophageal adenocarcinomaskin disease
✦AI Summary

LCE3E (late cornified envelope 3E) is a structural protein precursor that contributes to cornified envelope formation in the stratum corneum, the outermost layer of skin 1. As a member of the late cornified envelope gene family, LCE3E participates in keratinocyte differentiation and keratinization processes essential for skin barrier integrity 23. The gene exhibits protein-binding capacity and functions in cross-linking processes during epidermal development 3. LCE3E has significant disease relevance across multiple skin conditions. Genetic variants in the LCE3D-LCE3E locus are associated with psoriasis susceptibility, with particular importance in patients carrying deletions of LCE3B and LCE3C who may rely on compensatory expression of LCE3E 41. In atopic dermatitis, LCE3E functions as a hub gene orchestrating keratinization pathways and represents a potential therapeutic target 5. Notably, LCE3E expression is downregulated in diabetic foot ulcers, suggesting impaired wound healing capacity 3. Additionally, LCE3E expression correlates with angiolymphatic invasion and poor survival outcomes in laryngeal squamous cell carcinoma 6. Clinically, dietary vitamin D receptor ligands such as docosahexaenoic acid and curcumin can induce LCE3E expression and suppress TNFα-mediated inflammatory signaling, offering therapeutic potential for mild-to-moderate psoriasis 1. Understanding LCE3E regulation may inform novel therapeutic approaches targeting skin barrier dysfunction and keratinization defects.

Sources cited
1
LCE3E is a late cornified envelope gene encoding skin repair biomarkers; dietary VDR ligands DHA and curcumin induce LCE3E expression and oppose TNFα-mediated inflammatory signaling
PMID: 29401702
2
LCE3D-LCE3E locus is replicated as a known psoriasis susceptibility locus in whole-exome array analysis
PMID: 25854761
3
Lce3e mRNA expression is increased in healthy murine skin as a keratinocyte differentiation marker in response to dithranol
PMID: 33629779
4
LCE3E and LCE3D function as hub genes in co-expression networks of atopic dermatitis skin orchestrating keratinization pathways and serving as potential drug targets
PMID: 40017037
5
LCE3E and LCE3C are downregulated key genes in diabetic foot ulcer tissue involved in keratinization and keratinocyte differentiation
PMID: 36299206
6
LCE3E is part of a six-gene expression signature related to angiolymphatic invasion associated with poor survival in laryngeal squamous cell carcinoma
PMID: 32691230
7
LCE3E at locus 1q21.3 is confirmed as a previously known gene associated with hair shape variation
PMID: 29220522
8
LCE3E is identified as an upregulated m7G-related gene differentially expressed in lung squamous cell carcinoma tissues with prognostic implications
PMID: 37575065
Disease Associationsⓘ20
psoriasisOpen Targets
0.12Weak
atopic eczemaOpen Targets
0.05Suggestive
esophageal adenocarcinomaOpen Targets
0.04Suggestive
skin diseaseOpen Targets
0.04Suggestive
dermatophytosisOpen Targets
0.04Suggestive
dermatomycosisOpen Targets
0.03Suggestive
primary biliary cirrhosisOpen Targets
0.02Suggestive
functional neutrophil defectOpen Targets
0.02Suggestive
psoriasis vulgarisOpen Targets
0.02Suggestive
esophageal cancerOpen Targets
0.00Suggestive
head and neck squamous cell carcinomaOpen Targets
0.00Suggestive
overnutritionOpen Targets
0.00Suggestive
triple-negative breast cancerOpen Targets
0.00Suggestive
meningeal tuberculosisOpen Targets
0.00Suggestive
diabetes mellitusOpen Targets
0.00Suggestive
HyperkeratosisOpen Targets
0.00Suggestive
infectionOpen Targets
0.00Suggestive
injuryOpen Targets
0.00Suggestive
oral squamous cell carcinomaOpen Targets
0.00Suggestive
plantar wartOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
KRTAP5-9Shared pathway100%GRHL1Shared pathway100%LCE4AShared pathway100%LCE7AShared pathway100%KPLCEShared pathway100%KRTDAPShared pathway100%
Tissue Expression6 tissues
Heart
0%
Bone Marrow
0%
Ovary
0%
Liver
0%
Brain
0%
Lung
0%
Gene Interaction Network
Click a node to explore
LCE3EKRTAP5-9GRHL1LCE4ALCE7AKPLCEKRTDAP
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q5T5B0
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.85LoF Tolerant
pLIⓘ
0.19Tolerant
Observed/Expected LoF0.74 [0.22–1.85]
RankingsWhere LCE3E stands among ~20K protein-coding genes
  • #16,808of 20,598
    Most Researched11
  • #16,892of 17,882
    Most Constrained (LOEUF)1.85
Genes detectedLCE3E
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Whole-exome SNP array identifies 15 new susceptibility loci for psoriasis.
PMID: 25854761
Nat Commun · 2015
1.00
2
Transcriptome-wide analyses delineate the genetic architecture of expression variation in atopic dermatitis.
PMID: 40017037
HGG Adv · 2025
0.90
3
Induction of IL-1β and antimicrobial peptides as a potential mechanism for topical dithranol.
PMID: 33629779
Exp Dermatol · 2021
0.80
4
Bioactive Dietary VDR Ligands Regulate Genes Encoding Biomarkers of Skin Repair That Are Associated with Risk for Psoriasis.
PMID: 29401702
Nutrients · 2018
0.70
5
Establishment of a prognostic model toward lung squamous cell carcinoma based on m
PMID: 37575065
Physiol Genomics · 2023
0.60