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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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LIN7C
lin-7 cell polarity scaffold C
Chromosome 11 · 11p14.1
NCBI Gene: 55327Ensembl: ENSG00000148943.12HGNC: HGNC:17789UniProt: Q9NUP9
91PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
plasma membranecytoskeletal protein bindingcell-cell junctionprotein bindingobesityneurodegenerative diseaseosteoporosisesophageal ulcer
✦AI Summary

LIN7C (lin-7 cell polarity scaffold C) is a membrane-associated adaptor protein that plays a crucial role in maintaining cellular polarity and membrane organization. The protein functions as a component of multiprotein complexes that regulate the proper localization of channels, receptors, and transporters to specific membrane domains 1. LIN7C is particularly important in establishing tight junction integrity, as it directly contributes to urothelial barrier function and cellular polarity 2. The protein works in conjunction with other polarity proteins including Dlg1 and Scribble, where it can be indirectly recruited through Dlg1 interactions 3. In epithelial cells, LIN7C helps maintain proper cell-cell junctions and prevents epithelial-mesenchymal transition, with its downregulation promoting cell migration and EMT markers 4. The gene has clinical relevance, as variants near LIN7C have been associated with metabolic traits including obesity and type 2 diabetes risk 5, knee osteoarthritis development 6, and potentially schizophrenia-related cognitive dysfunction 7. Disruption of LIN7C function can compromise epithelial barrier integrity, contributing to pathological conditions such as bladder pain syndrome and cancer progression.

Sources cited
1
LIN7C functions as a membrane-associated protein involved in trafficking and localization of transporters
PMID: 40355756
2
LIN7C is essential for tight junction formation and urothelial barrier integrity
PMID: 23201090
3
LIN7C associates indirectly with Dlg1 and contributes to tight junction maintenance
PMID: 21849460
4
LIN7C prevents epithelial-mesenchymal transition and its downregulation promotes cell migration
PMID: 35761801
5
Variants near LIN7C are associated with obesity and type 2 diabetes risk
PMID: 20215397
6
LIN7C variants are associated with knee osteoarthritis development
PMID: 24339167
7
LIN7C is linked to psychotic symptom severity in schizophrenia
PMID: 40578226
Disease Associationsⓘ20
obesityOpen Targets
0.26Weak
neurodegenerative diseaseOpen Targets
0.22Weak
osteoporosisOpen Targets
0.14Weak
esophageal ulcerOpen Targets
0.11Weak
hypothyroidismOpen Targets
0.08Suggestive
Abnormality of the skeletal systemOpen Targets
0.07Suggestive
familial juvenile hyperuricemic nephropathy type 1Open Targets
0.07Suggestive
focal segmental glomerulosclerosisOpen Targets
0.07Suggestive
nephrotic syndromeOpen Targets
0.07Suggestive
familial idiopathic steroid-resistant nephrotic syndromeOpen Targets
0.06Suggestive
nephronophthisisOpen Targets
0.06Suggestive
Hyperuricemia - anemia - renal failureOpen Targets
0.06Suggestive
nephrotic syndrome, type 24Open Targets
0.06Suggestive
Dent diseaseOpen Targets
0.05Suggestive
Autosomal recessive infantile hypercalcemiaOpen Targets
0.05Suggestive
primary hyperoxaluria type 2Open Targets
0.05Suggestive
Autosomal dominant familial hematuria - retinal arteriolar tortuosity - contracturesOpen Targets
0.05Suggestive
autosomal dominant familial hematuria-retinal arteriolar tortuosity-contractures syndromeOpen Targets
0.05Suggestive
Genetic renal or urinary tract malformationOpen Targets
0.05Suggestive
familial juvenile hyperuricemic nephropathy type 2Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CRB3Protein interaction100%AMOTProtein interaction100%KCNJ12Protein interaction98%MPP7Protein interaction96%LIN7BProtein interaction95%PATJProtein interaction92%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
65%
Brain
51%
Ovary
27%
Heart
25%
Lung
23%
Gene Interaction Network
Click a node to explore
LIN7CCRB3AMOTKCNJ12MPP7LIN7BPATJ
PROTEIN STRUCTURE
Preparing viewer…
PDB3LRA · 2.95 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.22LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.75 [0.48–1.22]
RankingsWhere LIN7C stands among ~20K protein-coding genes
  • #5,253of 20,598
    Most Researched91
  • #12,824of 17,882
    Most Constrained (LOEUF)1.22
Genes detectedLIN7C
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The solute carrier superfamily interactome.
PMID: 40355756
Mol Syst Biol · 2025
1.00
2
miRNA-124 regulates palmitic acid-induced epithelial-mesenchymal transition and cell migration in human retinal pigment epithelial cells by targeting LIN7C.
PMID: 35761801
Exp Ther Med · 2022
0.90
3
Identification and characterization of human MPP7 gene and mouse Mpp7 gene in silico.
PMID: 14719143
Int J Mol Med · 2004
0.80
4
Implication of genetic variants near NEGR1, SEC16B, TMEM18, ETV5/DGKG, GNPDA2, LIN7C/BDNF, MTCH2, BCDIN3D/FAIM2, SH2B1, FTO, MC4R, and KCTD15 with obesity and type 2 diabetes in 7705 Chinese.
PMID: 20215397
J Clin Endocrinol Metab · 2010
0.70
5
Proteomic characterization of plasma exosomes in drug-naïve schizophrenia: Insights into psychosis and cognitive dysfunction.
PMID: 40578226
Psychiatry Res · 2025
0.60