HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
LYPLA2
lysophospholipase 2
Chromosome 1 · 1p36.11
NCBI Gene: 11313Ensembl: ENSG00000011009.13HGNC: HGNC:6738UniProt: A0A140VJC9
58PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytosolpalmitoyl-(protein) hydrolase activityextracellular exosomeprotein bindinglung adenocarcinomamelanomaknee fracturescleritis
✦AI Summary

LYPLA2 (lysophospholipase 2) is a versatile acyl-protein thioesterase that regulates cellular signaling through reversible protein depalmitoylation and lipid metabolism. The enzyme hydrolyzes fatty acids from S-acylated cysteine residues in key signaling proteins, including trimeric G proteins, STAT3, and various membrane-associated proteins 1. LYPLA2 plays a crucial role in inflammatory signaling by depalmitoylating phosphorylated STAT3, enabling its nuclear translocation and promoting TH17 cell differentiation 2. The enzyme also demonstrates lysophospholipase activity, hydrolyzing prostaglandin glycerol esters (PG-Gs) in the order PGD2-G > PGE2-G > PGF2α-G, and metabolizing 1-arachidonoylglycerol but not 2-arachidonoylglycerol 3. LYPLA2 cooperates with LYPLA1 to maintain cellular lipid homeostasis, with knockout studies showing that loss of both enzymes dramatically increases lysophospholipid levels and causes morphological changes 4. Clinically, LYPLA2 shows therapeutic relevance in inflammatory bowel disease, where its inhibition provides symptom relief 2, and its expression is upregulated in FOLFOX-responsive colorectal cancer patients 5. The enzyme's dual role in protein depalmitoylation and lipid metabolism positions it as a critical regulator of membrane dynamics and cellular signaling pathways.

Sources cited
1
LYPLA2 is an acyl-protein thioesterase that hydrolyzes fatty acids from S-acylated cysteine residues in proteins including trimeric G proteins
PMID: 29239216
2
LYPLA2 depalmitoylates phosphorylated STAT3 enabling nuclear translocation and promoting TH17 cell differentiation, with therapeutic relevance in IBD
PMID: 33029007
3
LYPLA2 has lysophospholipase activity hydrolyzing prostaglandin glycerol esters and 1-arachidonoylglycerol
PMID: 25301951
4
LYPLA2 cooperates with LYPLA1 to maintain lipid homeostasis, with dual knockout causing dramatic increases in lysophospholipid levels
PMID: 30482805
5
LYPLA2 expression is upregulated in FOLFOX-responsive colorectal cancer patients
PMID: 31893575
Disease Associationsⓘ20
lung adenocarcinomaOpen Targets
0.05Suggestive
melanomaOpen Targets
0.05Suggestive
knee fractureOpen Targets
0.04Suggestive
scleritisOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.03Suggestive
squamous cell carcinomaOpen Targets
0.03Suggestive
experimental autoimmune encephalomyelitisOpen Targets
0.03Suggestive
colorectal carcinomaOpen Targets
0.02Suggestive
malariaOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
colorectal neoplasmOpen Targets
0.01Suggestive
triple-negative breast cancerOpen Targets
0.01Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
COVID-19Open Targets
0.01Suggestive
myeloid sarcomaOpen Targets
0.01Suggestive
ovarian cancerOpen Targets
0.01Suggestive
Insulin resistanceOpen Targets
0.01Suggestive
Huntington diseaseOpen Targets
0.00Suggestive
renal fibrosisOpen Targets
0.00Suggestive
type 2 diabetes mellitusOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PLB1Protein interaction92%PNPLA6Protein interaction92%PLAAT3Protein interaction92%PNPLA7Protein interaction92%GAP43Protein interaction82%GPCPD1Protein interaction71%
Tissue Expression6 tissues
Liver
100%
Lung
60%
Bone Marrow
41%
Heart
36%
Ovary
35%
Brain
24%
Gene Interaction Network
Click a node to explore
LYPLA2PLB1PNPLA6PLAAT3PNPLA7GAP43GPCPD1
PROTEIN STRUCTURE
Preparing viewer…
PDB5SYN · 1.64 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.45Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.24 [0.13–0.45]
RankingsWhere LYPLA2 stands among ~20K protein-coding genes
  • #7,888of 20,598
    Most Researched58
  • #2,481of 17,882
    Most Constrained (LOEUF)0.45 · top quartile
Genes detectedLYPLA2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A STAT3 palmitoylation cycle promotes T
PMID: 33029007
Nature · 2020
1.00
2
Hypoxia-induced GPCPD1 depalmitoylation triggers mitophagy via regulating PRKN-mediated ubiquitination of VDAC1.
PMID: 36803235
Autophagy · 2023
0.90
3
Protein depalmitoylases.
PMID: 29239216
Crit Rev Biochem Mol Biol · 2018
0.80
4
A defective lysophosphatidic acid-autophagy axis increases miscarriage risk by restricting decidual macrophage residence.
PMID: 35220880
Autophagy · 2022
0.70
5
Lysophospholipases cooperate to mediate lipid homeostasis and lysophospholipid signaling.
PMID: 30482805
J Lipid Res · 2019
0.60