HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
MAP1LC3B
microtubule associated protein 1 light chain 3 beta
Chromosome 16 · 16q24.2
NCBI Gene: 81631Ensembl: ENSG00000140941.15HGNC: HGNC:13352UniProt: Q658J6
310PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cellular response to starvationphosphatidylethanolamine bindingubiquitin protein ligase bindingceramide bindingCOVID-19severe acute respiratory syndromedengue diseaseneurodegenerative disease
✦AI Summary

MAP1LC3B encodes a ubiquitin-like modifier protein essential for autophagosome formation and selective autophagy processes 1. The protein serves as a key marker of autophagy, with decreased MAP1LC3B puncta indicating impaired autophagy in disease states such as steatohepatitis 1. MAP1LC3B functions in multiple selective autophagy pathways, including mitophagy where it participates in the removal of damaged mitochondria through interaction with autophagy receptors like NDP52 and optineurin 2. The protein is recruited to autophagosomal membranes and works downstream of PINK1-mediated phospho-ubiquitin signaling in mitophagy 2. MAP1LC3B also mediates ER-phagy through interaction with the intrinsically disordered receptor TEX264, facilitating endoplasmic reticulum turnover during nutrient stress 3. Additionally, the protein is involved in STING-mediated noncanonical LC3B lipidation, which is critical for inflammasome activation and requires STING's proton channel activity 4. MAP1LC3B expression is regulated by transcription factor TFEB and can be induced by compounds like trehalose in neurodegenerative disease models 5. The protein's stabilization is also regulated through the VCP/p97-BECN1 pathway, where VCP/p97 UFMylation promotes BECN1 stability and facilitates autophagy initiation 6.

Sources cited
1
MAP1LC3B serves as an autophagy marker, with decreased puncta indicating impaired autophagy in steatohepatitis
PMID: 33190588
2
MAP1LC3B functions in mitophagy through interaction with autophagy receptors NDP52 and optineurin downstream of PINK1 signaling
PMID: 26266977
3
MAP1LC3B mediates ER-phagy through interaction with TEX264 receptor during nutrient stress
PMID: 31006538
4
MAP1LC3B participates in STING-mediated noncanonical lipidation critical for inflammasome activation
PMID: 37535724
5
MAP1LC3B expression is regulated by TFEB and can be induced by trehalose in neurodegenerative disease models
PMID: 30335591
6
MAP1LC3B regulation involves VCP/p97 UFMylation-mediated BECN1 stabilization for autophagy initiation
PMID: 38762759
Disease Associationsⓘ20
COVID-19Open Targets
0.51Moderate
severe acute respiratory syndromeOpen Targets
0.50Moderate
dengue diseaseOpen Targets
0.37Weak
neurodegenerative diseaseOpen Targets
0.37Weak
Non-Neoplastic Bile Duct DisorderOpen Targets
0.31Weak
smoking initiationOpen Targets
0.28Weak
Abnormality of refractionOpen Targets
0.28Weak
breast carcinomaOpen Targets
0.16Weak
neoplasmOpen Targets
0.10Weak
oral squamous cell carcinomaOpen Targets
0.09Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.08Suggestive
ovarian cancerOpen Targets
0.08Suggestive
atrial fibrillationOpen Targets
0.08Suggestive
gliomaOpen Targets
0.08Suggestive
infectionOpen Targets
0.08Suggestive
Townes-Brocks syndromeOpen Targets
0.08Suggestive
esophageal adenocarcinomaOpen Targets
0.08Suggestive
Alzheimer diseaseOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.07Suggestive
gastric cancerOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NEDD4Protein interaction100%ATG4AProtein interaction100%ATG4DProtein interaction99%ATG4CProtein interaction99%CAV1Protein interaction94%BNIP3Protein interaction87%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
94%
Heart
58%
Lung
38%
Ovary
23%
Liver
20%
Gene Interaction Network
Click a node to explore
MAP1LC3BNEDD4ATG4AATG4DATG4CCAV1BNIP3
PROTEIN STRUCTURE
Preparing viewer…
PDB8Q53 · 1.36 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.24LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.75 [0.47–1.24]
RankingsWhere MAP1LC3B stands among ~20K protein-coding genes
  • #1,107of 20,598
    Most Researched310 · top 10%
  • #13,078of 17,882
    Most Constrained (LOEUF)1.24
Genes detectedMAP1LC3B
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
TXNIP/VDUP1 attenuates steatohepatitis via autophagy and fatty acid oxidation.
PMID: 33190588
Autophagy · 2021
1.00
2
SIRT5 regulation of ammonia-induced autophagy and mitophagy.
PMID: 25700560
Autophagy · 2015
0.90
3
Human STING is a proton channel.
PMID: 37535724
Science · 2023
0.80
4
The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
PMID: 26266977
Nature · 2015
0.70
5
Extracellular SQSTM1 exacerbates acute pancreatitis by activating autophagy-dependent ferroptosis.
PMID: 36426912
Autophagy · 2023
0.60