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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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MARF1
meiosis regulator and mRNA stability factor 1
Chromosome 16 · 16p13.11
NCBI Gene: 9665Ensembl: ENSG00000166783.23HGNC: HGNC:29562UniProt: Q9Y4F3
48PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
membraneprotein bindingperoxisomeregulation of gene expression
✦AI Summary

MARF1 is a cytoplasmic endoribonuclease essential for female meiotic progression and oogenesis 1. Structurally, MARF1 contains a catalytic NYN-like domain with endoribonuclease activity, two RNA recognition motifs (RRMs), and eight LOTUS domains that mediate binding to target mRNAs 12. Mechanistically, MARF1 post-transcriptionally silences gene expression through two complementary pathways: it recruits the DCP1:DCP2 decapping complex to promote 5' decapping and degradation 1, and its LOTUS domains bind CCR4-NOT deadenylase complexes to shorten mRNA poly(A) tails 3. MARF1 predominantly recognizes 3' UTRs of target mRNAs 2. In P-bodies, MARF1 activity is antagonistically regulated by EDC4, which prevents LOTUS domain-mediated target binding 42. During oogenesis, MARF1 represses transposable element expression to maintain germline integrity, functionally analogous to the piRNA system in males 5. In somatic cells, MARF1 regulates genes like IFI44L involved in inflammatory responses 6. MARF1 copy number variations associate with female reproductive traits, indicating clinical relevance to fertility 7.

Sources cited
1
MARF1 contains NYN-like endoribonuclease domain, RRMs, and LOTUS domains; interacts with DCP1:DCP2 decapping complex; endoribonuclease activity is essential for target mRNA repression
PMID: 30364987
2
MARF1 LOTUS domains bind target mRNA 3' UTRs; RRM enhances endonuclease activity; EDC4 represses MARF1 by blocking LOTUS domain-mediated target binding
PMID: 32510323
3
MARF1 LOTUS domain recruits CCR4-NOT deadenylase complex to shorten mRNA poly(A) tails and suppress translation during oocyte maturation
PMID: 30279526
4
P-body architecture and EDC4 interaction antagonize MARF1-mediated mRNA decay by sequestering the decay enzyme
PMID: 35801873
5
MARF1 localizes to P-bodies, interacts with Ge-1 decapping complex component, regulates IFI44L expression in lymphocytes
PMID: 24755989
6
MARF1 is a LOTUS-domain protein essential for oogenesis/spermatogenesis; functions as post-transcriptional regulator and piRNA-mediated transcript silencing cofactor
PMID: 33544496
7
MARF1 copy number variations associate with female reproductive traits in genome-wide association studies
PMID: 35240056
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DCP1AProtein interaction100%EDC4Protein interaction79%TDRD5Protein interaction75%NDE1Protein interaction71%LOC728743Shared pathway33%ATXN7L3BShared pathway33%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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MARF1DCP1AEDC4TDRD5NDE1LOC728743ATXN7L3B
PROTEIN STRUCTURE
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PDB6FDL · 1.75 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.17Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.12 [0.08–0.17]
RankingsWhere MARF1 stands among ~20K protein-coding genes
  • #9,095of 20,598
    Most Researched48
  • #292of 17,882
    Most Constrained (LOEUF)0.17 · top 5%
Genes detectedMARF1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
P-bodies directly regulate MARF1-mediated mRNA decay in human cells.
PMID: 35801873
Nucleic Acids Res · 2022
1.00
2
Human MARF1 is an endoribonuclease that interacts with the DCP1:2 decapping complex and degrades target mRNAs.
PMID: 30364987
Nucleic Acids Res · 2018
0.90
3
LMKB/MARF1 localizes to mRNA processing bodies, interacts with Ge-1, and regulates IFI44L gene expression.
PMID: 24755989
PLoS One · 2014
0.80
4
LOTUS-domain proteins - developmental effectors from a molecular perspective.
PMID: 33544496
Biol Chem · 2020
0.70
5
LOTUS domain protein MARF1 binds CCR4-NOT deadenylase complex to post-transcriptionally regulate gene expression in oocytes.
PMID: 30279526
Nat Commun · 2018
0.60