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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
MED12L
mediator complex subunit 12L
Chromosome 3 Β· 3q25.1
NCBI Gene: 116931Ensembl: ENSG00000144893.13HGNC: HGNC:16050UniProt: A0A8I5KX78
27PubMed Papers
21Diseases
0Drugs
30Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTranscription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingpositive regulation of transcription by RNA polymerase IItranscription coactivator activitymediator complexNizon-Isidor syndromeIntellectual disabilityplatelet-type bleeding disorder 8genetic disorder
✦AI Summary

MED12L encodes a subunit of the mediator complex kinase module, which functions as a transcriptional coactivator essential for RNA polymerase II-mediated gene transcription 1. The protein is part of a four-subunit kinase module (along with MED13, CDK8/CDK19, and CCNC) that regulates transcriptional activity by modulating the mediator complex's interaction with RNA polymerase II 2. Functionally, MED12L acts through haploinsufficiency mechanisms - reduced gene dosage leads to moderate but significant alterations in RNA synthesis and transcriptional defects 1. Pathogenic variants in MED12L cause Nizon-Isidor syndrome, characterized by intellectual disability, developmental delay, speech impairment, autism spectrum disorder, corpus callosum abnormalities, and distinctive facial features 1. Recent evidence suggests MED12L may also contribute to mitotic instability, with one case showing diploid-triploid mosaicism 3. Beyond neurodevelopmental disorders, MED12L variants have been associated with susceptibility to guttate psoriasis in Chinese populations 4 and identified in genome-wide studies of infectious disease immune responses and irritable bowel syndrome 56. The gene exemplifies how mediator complex integrity is critical for proper neurological development and broader physiological functions.

Sources cited
1
MED12L is a kinase module subunit causing intellectual disability through haploinsufficiency and transcriptional defects
PMID: 31155615
2
MED12L is part of the CDK8 kinase module regulating transcriptional activity
PMID: 31520353
3
MED12L variants cause Nizon-Isidor syndrome and may increase mitotic instability risk
PMID: 40838347
4
MED12L variants are associated with guttate psoriasis susceptibility
PMID: 38735287
5
MED12L identified in genome-wide association study of infectious disease immune responses
PMID: 33204752
6
MED12L identified as candidate gene in irritable bowel syndrome genetic susceptibility
PMID: 39166955
Disease Associationsβ“˜21
Nizon-Isidor syndromeOpen Targets
0.70Moderate
Intellectual disabilityOpen Targets
0.52Moderate
platelet-type bleeding disorder 8Open Targets
0.52Moderate
genetic disorderOpen Targets
0.47Moderate
smoking initiationOpen Targets
0.40Moderate
Abnormal bleedingOpen Targets
0.40Weak
ThrombocytopeniaOpen Targets
0.40Weak
complex neurodevelopmental disorderOpen Targets
0.37Weak
neurodegenerative diseaseOpen Targets
0.34Weak
Impaired ADP-induced platelet aggregationOpen Targets
0.31Weak
insomniaOpen Targets
0.28Weak
Abnormal platelet functionOpen Targets
0.27Weak
Abnormal abdomen morphologyOpen Targets
0.18Weak
Abnormal corpus callosum morphologyOpen Targets
0.18Weak
Atypical behaviorOpen Targets
0.18Weak
Delayed speech and language developmentOpen Targets
0.18Weak
Motor delayOpen Targets
0.18Weak
SeizureOpen Targets
0.18Weak
Parkinson diseaseOpen Targets
0.18Weak
developmental disorder of mental healthOpen Targets
0.15Weak
Nizon-Isidor syndromeUniProt
Pathogenic Variants30
NM_001393769.1(MED12L):c.1870C>T (p.Arg624Ter)Pathogenic
Nizon-Isidor syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 624
NM_001393769.1(MED12L):c.3892G>T (p.Glu1298Ter)Pathogenic
not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 1298
NM_001393769.1(MED12L):c.3733C>T (p.Arg1245Ter)Pathogenic
Inborn genetic diseases|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1245
NM_001393769.1(MED12L):c.5782C>T (p.Arg1928Ter)Likely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 1928
NM_001393769.1(MED12L):c.2394_2395del (p.Val800fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 800
NM_001393769.1(MED12L):c.205-2A>TLikely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2025
NM_001393769.1(MED12L):c.3493C>T (p.Arg1165Ter)Likely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2024β†’ Residue 1165
NM_001393769.1(MED12L):c.1946del (p.Lys649fs)Likely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2024β†’ Residue 649
NM_001393769.1(MED12L):c.2895_2896del (p.Tyr966fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 966
NM_001393769.1(MED12L):c.4354_4355insG (p.Leu1452fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 1452
NM_001393769.1(MED12L):c.565C>T (p.Gln189Ter)Likely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2024β†’ Residue 189
NM_001393769.1(MED12L):c.6298-2A>CLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2023
NM_001393769.1(MED12L):c.3664+1G>ALikely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2023
NM_001393769.1(MED12L):c.3385C>T (p.Arg1129Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 1129
NM_001393769.1(MED12L):c.4927-1G>TLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2023
NM_001393769.1(MED12L):c.5329_5330delinsTG (p.Pro1777Ter)Likely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 1777
NM_001393769.1(MED12L):c.3664+2T>GLikely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2022
NM_001393769.1(MED12L):c.2746_2747dup (p.Cys917fs)Likely pathogenic
Nizon-Isidor syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 917
NM_001393769.1(MED12L):c.6097C>T (p.Gln2033Ter)Likely pathogenic
not specified
β˜…β˜†β˜†β˜†2022β†’ Residue 2033
NM_001393769.1(MED12L):c.4590+1G>ALikely pathogenic
MED12L-associated neurodevelopmental disorder
β˜…β˜†β˜†β˜†2022
View on ClinVar β†—
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q86YW9
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.23Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.17 [0.14–0.23]
RankingsWhere MED12L stands among ~20K protein-coding genes
  • #12,602of 20,598
    Most Researched27
  • #1,822of 5,498
    Most Pathogenic Variants30
  • #613of 17,882
    Most Constrained (LOEUF)0.23 Β· top 5%
Genes detectedMED12L
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Variants in MED12L, encoding a subunit of the mediator kinase module, are responsible for intellectual disability associated with transcriptional defect.
PMID: 31155615
Genet Med Β· 2019
1.00
2
Rare MED12L Variants Are Associated with Susceptibility to Guttate Psoriasis in the Han Chinese Population.
PMID: 38735287
Dermatology Β· 2024
0.90
3
Genetic, Clinical and Neuroradiological Spectrum of MED-Related Disorders: An Updated Review.
PMID: 41465117
Genes (Basel) Β· 2025
0.80
4
Genetic Determinants of Antibody-Mediated Immune Responses to Infectious Diseases Agents: A Genome-Wide and HLA Association Study.
PMID: 33204752
Open Forum Infect Dis Β· 2020
0.70
5
Unraveling the genetic susceptibility of irritable bowel syndrome: integrative genome-wide analyses in 845Β 492 individuals: a diagnostic study.
PMID: 39166955
Int J Surg Β· 2025
0.60