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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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MEF2D
myocyte enhancer factor 2D
Chromosome 1 · 1q22
NCBI Gene: 4209Ensembl: ENSG00000116604.20HGNC: HGNC:6997UniProt: Q14814
130PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA polymerase II transcription regulatory region sequence-specific DNA bindinghistone deacetylase bindingRNA polymerase II-specific DNA-binding transcription factor bindingDNA-binding transcription factor binding
✦AI Summary

MEF2D (myocyte enhancer factor 2D) is a transcription factor that plays critical roles in both normal development and leukemogenesis. In acute lymphoblastic leukemia (ALL), MEF2D undergoes chr1 rearrangements with multiple fusion partners including BCL9, CSF1R, DAZAP1, HNRNPUL1, SS18, and FOXJ2 1. These MEF2D rearrangements occur in approximately 5.3% of B-ALL cases lacking other recurring alterations and define a distinct molecular subtype with characteristic features 1. MEF2D-rearranged ALL patients typically present at older ages, have distinct immunophenotypes, and demonstrate poor clinical outcomes 1 2. The fusion proteins result in enhanced MEF2D transcriptional activity and lymphoid transformation, with activation of HDAC9 expression making these leukemias sensitive to histone deacetylase inhibitor treatment 1. Single-cell RNA sequencing studies reveal that MEF2D-rearranged B-ALL shows enrichment of pre-B cell developmental states 3. Beyond B-ALL, MEF2D also contributes to acute myeloid leukemia progression through a positive feedback loop with IRF8 and regulation of the MEF2D-CEBPE transcriptional axis 4. These findings establish MEF2D rearrangements as defining a high-risk ALL subtype requiring specialized therapeutic approaches.

Sources cited
1
MEF2D rearrangements with multiple fusion partners in B-ALL, frequency, clinical characteristics, and therapeutic sensitivity
PMID: 27824051
2
MEF2D-rearranged ALL classified as intermediate-risk with specific survival outcomes
PMID: 33895809
3
MEF2D-rearranged B-ALL enrichment of pre-B cell developmental states by single-cell analysis
PMID: 38106088
4
MEF2D roles in AML through IRF8 feedback loop and CEBPE axis regulation
PMID: 39017853
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
HDAC4Protein interaction97%HDAC9Protein interaction96%EP300Protein interaction94%CABIN1Protein interaction94%HDAC5Protein interaction94%PPARGC1AProtein interaction93%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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MEF2DHDAC4HDAC9EP300CABIN1HDAC5PPARGC1A
PROTEIN STRUCTURE
Preparing viewer…
PDB8C84 · 1.90 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.28Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.17 [0.10–0.28]
RankingsWhere MEF2D stands among ~20K protein-coding genes
  • #3,600of 20,598
    Most Researched130 · top quartile
  • #1,019of 17,882
    Most Constrained (LOEUF)0.28 · top 10%
Genes detectedMEF2D
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Emerging molecular subtypes and therapies in acute lymphoblastic leukemia.
PMID: 37120350
Semin Diagn Pathol · 2023
1.00
2
Genomic analyses identify recurrent MEF2D fusions in acute lymphoblastic leukaemia.
PMID: 27824051
Nat Commun · 2016
0.90
3
Paediatric-type diffuse high-grade gliomas in the 5th CNS WHO Classification.
PMID: 36534421
Pathologica · 2022
0.80
4
Genomic Profiling of Adult and Pediatric B-cell Acute Lymphoblastic Leukemia.
PMID: 27428428
EBioMedicine · 2016
0.70
5
The Molecular and Biological Function of MEF2D in Leukemia.
PMID: 39017853
Adv Exp Med Biol · 2024
0.60