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GeneE
50 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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EP300
EP300 lysine acetyltransferase
Chromosome 22 Β· 22q13.2
NCBI Gene: 2033Ensembl: ENSG00000100393.16HGNC: HGNC:3373UniProt: A0A669KB12
1,399PubMed Papers
22Diseases
0Drugs
265Pathogenic Variants
FUNCTIONAL ROLE
ApoptosisHighly ConstrainedHub GeneTranscription Factor
RESEARCH IMPACT
Highly StudiedTrendingVariant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein-lysine-acetyltransferase activitytranscription coactivator bindinginternal protein amino acid acetylationapoptotic processRubinstein-Taybi syndrome due to EP300 haploinsufficiencyRubinstein-Taybi syndromeMenke-Hennekam syndrome 2cancer
✦AI Summary

EP300 (p300) is a lysine acetyltransferase that functions as a transcriptional coactivator through chr22 modification and enhancer regulation 1. The protein catalyzes histone acetylation at H3K27 and other sites, establishing active enhancer marks that promote gene transcription 23. Beyond acetylation, EP300 exhibits diverse acyltransferase activities, including lysine crotonylation and 2-hydroxyisobutyrylation, which regulate distinct cellular processes like transcription and glycolysis respectively 45. EP300 controls enhancer landscapes by interacting with lineage-specific transcription factors and maintaining core regulatory circuitries in various cell types 3. The protein also regulates chr22 organization through phase separation mechanisms, where histone acetylation by p300 dissolves chr22 condensates and enables formation of distinct nuclear subdomains 6. Pathogenic variants in EP300 cause Rubinstein-Taybi syndrome 2, characterized by intellectual disability and developmental abnormalities 1. Additionally, EP300 is frequently mutated in small-cell lung cancer and serves as a therapeutic target in hematologic malignancies, where selective inhibition or degradation disrupts oncogenic transcriptional programs 728.

Sources cited
1
EP300 encodes p300 protein involved in transcription regulation and histone acetylation, with variants causing Rubinstein-Taybi syndrome 2
PMID: 38471765
2
EP300/CBP establishes H3K27 acetylation marks at enhancers and can be therapeutically targeted in hematologic malignancies
PMID: 37995682
3
EP300 controls enhancer landscapes and core regulatory circuitries by interacting with transcription factors like TFAP2Ξ²
PMID: 34772733
4
p300 has crotonyltransferase activity that stimulates transcription more than acetylation
PMID: 25818647
5
p300 catalyzes lysine 2-hydroxyisobutyrylation to regulate glycolysis
PMID: 29775581
6
Histone acetylation by p300 antagonizes chromatin phase separation and enables formation of distinct nuclear subdomains
PMID: 31543265
7
EP300 is recurrently mutated in small-cell lung cancer
PMID: 22941188
8
EP300 can be targeted for therapeutic degradation to disrupt enhancer activity
PMID: 33400925
Disease Associationsβ“˜22
Rubinstein-Taybi syndrome due to EP300 haploinsufficiencyOpen Targets
0.80Strong
Rubinstein-Taybi syndromeOpen Targets
0.71Strong
Menke-Hennekam syndrome 2Open Targets
0.70Moderate
cancerOpen Targets
0.60Moderate
genetic disorderOpen Targets
0.55Moderate
head and neck squamous cell carcinomaOpen Targets
0.54Moderate
Rubinstein-Taybi syndrome due to CREBBP mutationsOpen Targets
0.53Moderate
cervical squamous cell carcinomaOpen Targets
0.52Moderate
neurodegenerative diseaseOpen Targets
0.52Moderate
urinary bladder cancerOpen Targets
0.51Moderate
colorectal cancerOpen Targets
0.51Moderate
Intellectual disabilityOpen Targets
0.49Moderate
colon carcinomaOpen Targets
0.49Moderate
colorectal carcinomaOpen Targets
0.46Moderate
microcephalyOpen Targets
0.46Moderate
diffuse large B-cell lymphomaOpen Targets
0.45Moderate
small cell lung carcinomaOpen Targets
0.42Moderate
melanomaOpen Targets
0.42Moderate
colorectal adenocarcinomaOpen Targets
0.42Moderate
urinary bladder carcinomaOpen Targets
0.39Weak
Menke-Hennekam syndrome 2UniProt
Rubinstein-Taybi syndrome 2UniProt
Pathogenic Variants265
NM_001429.4(EP300):c.3163C>T (p.Arg1055Ter)Pathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 1055
NM_001429.4(EP300):c.5485C>T (p.Arg1829Cys)Likely pathogenic
not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 1829
NM_001429.4(EP300):c.1371_1374del (p.Ser457fs)Pathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 457
NM_001429.4(EP300):c.104_107del (p.Ser35fs)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided|Menke-Hennekam syndrome 2;Rubinstein-Taybi syndrome due to CREBBP mutations;Colorectal cancer;Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|Neurodevelopmental delay
β˜…β˜…β˜†β˜†2025β†’ Residue 35
NM_001429.4(EP300):c.6915_6918del (p.Asn2305fs)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided|Menke-Hennekam syndrome 2;Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 2305
NM_001429.4(EP300):c.4783T>G (p.Phe1595Val)Pathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|Multiple congenital anomalies|Inborn genetic diseases|EP300-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 1595
NM_001429.4(EP300):c.3684_3687del (p.Lys1228fs)Pathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 1228
NM_001429.4(EP300):c.6970dup (p.His2324fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 2324
NM_001429.4(EP300):c.1282+1G>APathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided|Colon adenocarcinoma
β˜…β˜…β˜†β˜†2024
NM_001429.4(EP300):c.3707dup (p.Asn1236fs)Pathogenic
Rubinstein-Taybi syndrome due to CREBBP mutations|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1236
NM_001429.4(EP300):c.4933C>T (p.Arg1645Ter)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|EP300-related disorder|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1645
NM_001429.3(EP300):c.3857A>GPathogenic
Intellectual disability|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided|See cases|EP300-related disorder
β˜…β˜…β˜†β˜†2024
NM_001429.4(EP300):c.3671+1G>APathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|EP300-related disorder|Cervical cancer|Squamous cell carcinoma of the head and neck
β˜…β˜…β˜†β˜†2024
NM_001429.4(EP300):c.6298_6317del (p.Ile2100fs)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 2100
NM_001429.4(EP300):c.598C>T (p.Arg200Ter)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|EP300-related disorder
β˜…β˜…β˜†β˜†2024β†’ Residue 200
NM_001429.4(EP300):c.6787C>T (p.Arg2263Ter)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 2263
NM_001429.4(EP300):c.2225del (p.Pro742fs)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2022β†’ Residue 742
NM_001429.4(EP300):c.4585C>T (p.Arg1529Ter)Pathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency;Colorectal carcinoma
β˜…β˜…β˜†β˜†2021β†’ Residue 1529
NM_001429.4(EP300):c.2660C>T (p.Thr887Ile)Pathogenic
Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2020β†’ Residue 887
NM_001429.4(EP300):c.2333dup (p.Asn779fs)Pathogenic
not provided|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2020β†’ Residue 779
View on ClinVar β†—
Related Genes
CAMK2AProtein interaction100%CAMK2BProtein interaction100%CEBPDProtein interaction100%CHD4Protein interaction100%CTBP2Protein interaction100%EBF1Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
32%
Lung
28%
Brain
21%
Heart
21%
Liver
18%
Gene Interaction Network
Click a node to explore
EP300CAMK2ACAMK2BCEBPDCHD4CTBP2EBF1
PROTEIN STRUCTURE
Preparing viewer…
PDB5BT3 Β· 1.05 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.16Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.12 [0.09–0.16]
RankingsWhere EP300 stands among ~20K protein-coding genes
  • #94of 20,598
    Most Researched1,399 Β· top 1%
  • #243of 5,498
    Most Pathogenic Variants265 Β· top 5%
  • #267of 17,882
    Most Constrained (LOEUF)0.16 Β· top 5%
Genes detectedEP300
Sources retrieved50 papers
Response timeβ€”
πŸ“„ Sources
50β–Ό
1
Therapeutic targeting of EP300/CBP by bromodomain inhibition in hematologic malignancies.
PMID: 37995682
Cancer Cell Β· 2023
1.00
2
Organization of Chromatin by Intrinsic and Regulated Phase Separation.
PMID: 31543265
Cell Β· 2019
0.90
3
CREBBP/EP300 mutations promoted tumor progression in diffuse large B-cell lymphoma through altering tumor-associated macrophage polarization via FBXW7-NOTCH-CCL2/CSF1 axis.
PMID: 33431788
Signal Transduct Target Ther Β· 2021
0.82
4
Diagnosis and management in Rubinstein-Taybi syndrome: first international consensus statement.
PMID: 38471765
J Med Genet Β· 2024
0.80
5
CBP-HSF2 structural and functional interplay in Rubinstein-Taybi neurodevelopmental disorder.
PMID: 36385105
Nat Commun Β· 2022
0.80