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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
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MGAT2
alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
Chromosome 14 Β· 14q21.3
NCBI Gene: 4247Ensembl: ENSG00000168282.6HGNC: HGNC:7045UniProt: Q10469
62PubMed Papers
21Diseases
0Drugs
12Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
Golgi apparatusmanganese ion bindingprotein homodimerization activityprotein N-linked glycosylationMGAT2-congenital disorder of glycosylationcongenital disorder of glycosylationcongenital disorder of glycosylation type IICOVID-19
✦AI Summary

MGAT2 (alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase) is a Golgi-localized glycosyltransferase that catalyzes the transfer of N-acetylglucosamine onto Ξ±-1,6-mannose residues in nascent N-linked glycan chains, creating the second branch in complex N-glycans 1. This enzyme is essential for converting oligomannose to complex glycan structures 2. The gene is located on chromosome 14 as a single-exon gene with housekeeping gene characteristics 12. MGAT2 shows particularly high expression in the small intestine and liver, where it regulates triglyceride absorption and homeostasis 34. Loss of MGAT2 function causes congenital disorder of glycosylation type IIa (CDG-IIa), manifesting as severe gastrointestinal abnormalities, hematologic defects, developmental disability, and immune dysfunction including hypogammaglobulinemia and defective lymphocyte proliferation 56. Therapeutically, MGAT2 inhibition shows promise for metabolic diseases; the selective MGAT2 inhibitor BMS-963272 decreased inflammation and liver fibrosis in NASH models while increasing GLP-1 and reducing body weight in human subjects, without gastrointestinal tolerability issues 3. Recent evidence suggests elevated MGAT2 is associated with increased glioblastoma risk, potentially through immune-related macrophage pathways 7.

Sources cited
1
MGAT2 catalyzes transfer of GlcNAc to Ξ±-1,6-mannose in N-glycan synthesis; located on chromosome 14q21 as single-exon gene
PMID: 7635144
2
MGAT2 is essential for converting oligomannose to complex N-glycans; housekeeping gene with multiple promoter elements
PMID: 9579808
3
MGAT2 highly expressed in small intestine and liver for triglyceride homeostasis; MGAT2 inhibitor decreases NASH inflammation and fibrosis, increases GLP-1, reduces body weight
PMID: 36323235
4
MGAT2 expression in intestinal epithelium promotes dietary fat absorption; HuR regulates MGAT2 pre-mRNA processing
PMID: 38748875
5
MGAT2 deficiency causes CDG-IIa with gastrointestinal, hematologic, and osteogenic abnormalities; Mgat2-null mice model human disease
PMID: 12417412
6
MGAT2-CDG associated with immune dysfunction including hypogammaglobulinemia and defective lymphocyte proliferation
PMID: 33044030
7
Elevated MGAT2 associated with increased glioblastoma risk through immune-related macrophage pathways
PMID: 39788365
Disease Associationsβ“˜21
MGAT2-congenital disorder of glycosylationOpen Targets
0.79Strong
congenital disorder of glycosylationOpen Targets
0.42Moderate
congenital disorder of glycosylation type IIOpen Targets
0.37Weak
COVID-19Open Targets
0.37Weak
Abnormal facial shapeOpen Targets
0.26Weak
Abnormal glycosylationOpen Targets
0.26Weak
Global developmental delayOpen Targets
0.26Weak
genetic disorderOpen Targets
0.19Weak
lagophthalmosOpen Targets
0.06Suggestive
liver diseaseOpen Targets
0.06Suggestive
autoimmune disorder of musculoskeletal systemOpen Targets
0.06Suggestive
obesityOpen Targets
0.05Suggestive
corneal neovascularizationOpen Targets
0.04Suggestive
Abnormality of the gastrointestinal tractOpen Targets
0.04Suggestive
congenital myasthenic syndromes with glycosylation defectOpen Targets
0.03Suggestive
ring chromosome YOpen Targets
0.03Suggestive
filarial elephantiasisOpen Targets
0.03Suggestive
refractory celiac diseaseOpen Targets
0.03Suggestive
congenital myopathy 23Open Targets
0.03Suggestive
hypermanganesemia with dystonia 2Open Targets
0.03Suggestive
Congenital disorder of glycosylation 2AUniProt
Pathogenic Variants12
NM_002408.4(MGAT2):c.711G>C (p.Lys237Asn)Likely pathogenic
MGAT2-congenital disorder of glycosylation|Abnormal facial shape;Abnormal glycosylation;Global developmental delay
β˜…β˜…β˜†β˜†2024β†’ Residue 237
NM_002408.4(MGAT2):c.1006_1009del (p.Asp336fs)Likely pathogenic
not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 336
NM_002408.4(MGAT2):c.1199_1202del (p.Asn400fs)Likely pathogenic
MGAT2-congenital disorder of glycosylation|MGAT2-related disorder
β˜…β˜†β˜†β˜†2024β†’ Residue 400
NM_002408.4(MGAT2):c.1085G>A (p.Trp362Ter)Likely pathogenic
MGAT2-congenital disorder of glycosylation
β˜…β˜†β˜†β˜†2023β†’ Residue 362
NM_002408.4(MGAT2):c.346dup (p.Arg116fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2019β†’ Residue 116
NM_002408.4(MGAT2):c.745C>T (p.Arg249Ter)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2018β†’ Residue 249
NM_002408.4(MGAT2):c.952A>G (p.Asn318Asp)Pathogenic
MGAT2-congenital disorder of glycosylation
β˜†β˜†β˜†β˜†2000β†’ Residue 318
NM_002408.4(MGAT2):c.1017T>A (p.Cys339Ter)Pathogenic
MGAT2-congenital disorder of glycosylation
β˜†β˜†β˜†β˜†2000β†’ Residue 339
NM_002408.4(MGAT2):c.785A>G (p.His262Arg)Pathogenic
MGAT2-congenital disorder of glycosylation
β˜†β˜†β˜†β˜†1996β†’ Residue 262
NM_002408.4(MGAT2):c.753dup (p.Ala252fs)Pathogenic
MGAT2-congenital disorder of glycosylation
β˜†β˜†β˜†β˜†β†’ Residue 252
NM_002408.4(MGAT2):c.91C>T (p.Gln31Ter)Pathogenic
MGAT2-congenital disorder of glycosylation
β˜†β˜†β˜†β˜†β†’ Residue 31
NM_002408.4(MGAT2):c.799G>C (p.Asp267His)Pathogenic
MGAT2-congenital disorder of glycosylation
β˜†β˜†β˜†β˜†β†’ Residue 267
View on ClinVar β†—
Related Genes
MAN2A2Protein interaction98%MAN2A1Protein interaction98%MGAT3Protein interaction97%MGAT4DProtein interaction91%MGAT1Protein interaction80%MGAT5Protein interaction77%
Tissue Expression6 tissues
Brain
100%
Liver
34%
Lung
16%
Ovary
15%
Bone Marrow
1%
Heart
0%
Gene Interaction Network
Click a node to explore
MGAT2MAN2A2MAN2A1MGAT3MGAT4DMGAT1MGAT5
PROTEIN STRUCTURE
Preparing viewer…
PDB5VCM Β· 1.60 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.74LoF Tolerant
pLIβ“˜
0.01Tolerant
Observed/Expected LoF0.49 [0.34–0.74]
RankingsWhere MGAT2 stands among ~20K protein-coding genes
  • #7,477of 20,598
    Most Researched62
  • #2,684of 5,498
    Most Pathogenic Variants12
  • #5,825of 17,882
    Most Constrained (LOEUF)0.74
Genes detectedMGAT2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
MGAT2 inhibitor decreases liver fibrosis and inflammation in murine NASH models and reduces body weight in human adults with obesity.
PMID: 36323235
Cell Metab Β· 2022
1.00
2
HuR promotes triglyceride synthesis and intestinal fat absorption.
PMID: 38748875
Cell Rep Β· 2024
0.90
3
Exploring the relationship between MGAT2 and glioblastoma: A Mendelian Randomization and bioinformatics approach.
PMID: 39788365
Brain Res Β· 2025
0.80
4
PMID: 20301507
0.70
5
Monoacylglycerol Acyltransferase 2 (MGAT2) Inhibitors for the Treatment of Metabolic Diseases and Nonalcoholic Steatohepatitis (NASH).
PMID: 29986142
J Med Chem Β· 2018
0.60