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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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MMP16
matrix metallopeptidase 16
Chromosome 8 · 8q21.3
NCBI Gene: 4325Ensembl: ENSG00000156103.16HGNC: HGNC:7162UniProt: P51512
75PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedProtease
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
proteolysisprotein processingmetalloendopeptidase activityzinc ion bindingAbnormality of the skeletal systemschizophreniaIrritabilityneurodegenerative disease
✦AI Summary

MMP16 (matrix metallopeptidase 16) is a membrane-type matrix metalloproteinase that functions as a zinc-containing endopeptidase involved in extracellular matrix remodeling and tissue development 1. As a member of the MT-MMP family, MMP16 degrades various ECM components including collagen type III and fibronectin, and activates progelatinase A 1. The enzyme plays crucial roles in multiple developmental processes, particularly lung alveolarization, where it shows low expression during early developmental stages but increases significantly during the alveolar stage 2. MMP16 is also essential for ovarian function, with its expression increased by hCG administration during the periovulatory period across species including rats, macaques, and humans 3. Disease relevance includes associations with bronchopulmonary dysplasia in preterm infants, where specific MMP16 polymorphisms provide protective effects 2, and involvement in osteosarcopenia as a risk factor 4. Additionally, MMP16 contributes to vascular calcification and coronary artery disease 5, and is implicated in various cancers including hepatocellular carcinoma where it promotes malignancy 6. Clinical significance extends to cleft lip/palate susceptibility 7 and age-related cataract progression 8.

Sources cited
1
MMP16 is a zinc-containing endopeptidase and membrane-type MMP that degrades ECM components
PMID: 27271600
2
MMP16 plays a role in lung alveolarization and BPD susceptibility through polymorphisms
PMID: 18784838
3
MMP16 expression increases during ovulation across multiple species
PMID: 24920038
4
MMP16 is associated with increased risk of osteosarcopenia
PMID: 41071635
5
MMP16 is associated with coronary artery calcification and vascular disease
PMID: 38817323
6
MMP16 promotes hepatocellular carcinoma malignancy
PMID: 36594718
7
MMP16 variants are associated with cleft lip/palate susceptibility
PMID: 36120833
8
MMP16 is involved in age-related cataract progression
PMID: 38966002
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.51Moderate
schizophreniaOpen Targets
0.48Moderate
IrritabilityOpen Targets
0.39Weak
neurodegenerative diseaseOpen Targets
0.34Weak
response to antihypertensive drugOpen Targets
0.34Weak
Chronic Obstructive AsthmaOpen Targets
0.33Weak
Abnormality of refractionOpen Targets
0.33Weak
glomerulonephritisOpen Targets
0.31Weak
cervical carcinomaOpen Targets
0.30Weak
psoriasisOpen Targets
0.29Weak
secondary malignant neoplasmOpen Targets
0.28Weak
inherited hemoglobinopathyOpen Targets
0.28Weak
skin diseaseOpen Targets
0.26Weak
Precordial painOpen Targets
0.26Weak
subarachnoid hemorrhageOpen Targets
0.24Weak
migraine disorderOpen Targets
0.23Weak
type 2 diabetes mellitusOpen Targets
0.22Weak
adolescent idiopathic scoliosisOpen Targets
0.20Weak
diabetic ketoacidosisOpen Targets
0.19Weak
hyperpituitarismOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TIMP2Protein interaction96%HBEGFProtein interaction92%GNAI1Protein interaction91%GNAI3Protein interaction90%GNAI2Protein interaction90%SPOCK3Protein interaction85%
Tissue Expression6 tissues
Brain
100%
Heart
75%
Ovary
49%
Liver
4%
Lung
3%
Bone Marrow
1%
Gene Interaction Network
Click a node to explore
MMP16TIMP2HBEGFGNAI1GNAI3GNAI2SPOCK3
PROTEIN STRUCTURE
Preparing viewer…
PDB1RM8 · 1.80 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.30Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.18 [0.11–0.30]
RankingsWhere MMP16 stands among ~20K protein-coding genes
  • #6,342of 20,598
    Most Researched75
  • #1,133of 17,882
    Most Constrained (LOEUF)0.30 · top 10%
Genes detectedMMP16
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Role of Matrix Metalloproteinases in Photoaging and Photocarcinogenesis.
PMID: 27271600
Int J Mol Sci · 2016
1.00
2
Circular RNA Circ_0122396 Regulates Human Lens Epithelial Cell Progression by Regulating miR-23a-3p and MMP16 in Age-Related Cataract.
PMID: 38966002
Curr Eye Res · 2024
0.90
3
Matrix metalloproteinase gene polymorphisms and bronchopulmonary dysplasia: identification of MMP16 as a new player in lung development.
PMID: 18784838
PLoS One · 2008
0.80
4
Multi-omics Mendelian randomization and single-cell analysis identify novel therapeutic targets for osteosarcopenia.
PMID: 41071635
J Gerontol A Biol Sci Med Sci · 2025
0.70
5
Ovarian membrane-type matrix metalloproteinases: induction of MMP14 and MMP16 during the periovulatory period in the rat, macaque, and human.
PMID: 24920038
Biol Reprod · 2014
0.60