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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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MRPL40
mitochondrial ribosomal protein L40
Chromosome 22 · 22q11.21
NCBI Gene: 64976Ensembl: ENSG00000185608.10HGNC: HGNC:14491UniProt: Q9NQ50
69PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingmitochondrionmitochondrial large ribosomal subunitneurodegenerative diseasecryptorchidismcolorectal carcinomaneuroblastoma
✦AI Summary

MRPL40 encodes mitochondrial ribosomal protein L40, a component of the large ribosomal subunit essential for mitochondrial protein synthesis and proteostasis 1. The protein functions within mitochondrial ribosomes to translate mitochondrial DNA-encoded genes, with haploinsufficiency leading to reduced mitochondrial protein levels and ATP production 2. MRPL40 is located within the 22q11.2 chr22 region, and its hemizygous deletion contributes to 22q11.2 deletion syndrome pathogenesis through multiple mechanisms 3. Mechanistically, MRPL40 haploinsufficiency disrupts mitochondrial calcium homeostasis by impairing calcium extrusion through the mitochondrial permeability transition pore, leading to abnormally high cytosolic calcium transients in presynaptic terminals 3. This results in deficient short-term synaptic plasticity and working memory impairments characteristic of schizophrenia 3. During neurodevelopment, MRPL40 regulates neural stem and progenitor cell proliferation, with mutations causing microcephaly and behavioral deficits 4. The gene also shows clinical significance in cancer, where altered expression correlates with poor prognosis in breast cancer patients and promotes colorectal cancer cell proliferation and migration 56. Additionally, MRPL40 has been identified as a potential biomarker for primary open-angle glaucoma 7.

Sources cited
1
MRPL40 is a mitochondrial ribosomal protein component essential for mitochondrial proteostasis and synapse development
PMID: 34261699
2
MRPL40 haploinsufficiency reduces mitochondrial protein levels and ATP production in iPSC-derived neurons
PMID: 31740674
3
MRPL40 haploinsufficiency disrupts mitochondrial calcium homeostasis and causes synaptic plasticity defects and working memory impairments
PMID: 27184122
4
MRPL40 regulates neural stem and progenitor cell proliferation during neurodevelopment
PMID: 37794116
5
Low MRPL40 expression correlates with poor prognosis in breast cancer patients
PMID: 35739158
6
MRPL40 promotes colorectal cancer cell proliferation and migration
PMID: 37636370
7
MRPL40 is identified as a risk gene and potential biomarker for primary open-angle glaucoma
PMID: 40077931
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.25Weak
cryptorchidismOpen Targets
0.04Suggestive
colorectal carcinomaOpen Targets
0.03Suggestive
neuroblastomaOpen Targets
0.01Suggestive
male infertilityOpen Targets
0.01Suggestive
systemic juvenile idiopathic arthritisOpen Targets
0.01Suggestive
Alzheimer diseaseOpen Targets
0.01Suggestive
22q11.2 deletion syndromeOpen Targets
0.01Suggestive
breast carcinomaOpen Targets
0.01Suggestive
microcephalyOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.00Suggestive
breast cancerOpen Targets
0.00Suggestive
Cognitive impairmentOpen Targets
0.00Suggestive
psychosisOpen Targets
0.00Suggestive
Neurodevelopmental disorderOpen Targets
0.00Suggestive
hepatocellular carcinomaOpen Targets
0.00Suggestive
depressive disorderOpen Targets
0.00Suggestive
open-angle glaucomaOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MRPS6Protein interaction100%MRPS9Protein interaction100%MRPL36Protein interaction100%MRPS2Protein interaction100%MRPS5Protein interaction100%MRPS7Protein interaction100%
Tissue Expression6 tissues
Liver
100%
Heart
93%
Ovary
44%
Brain
37%
Bone Marrow
36%
Lung
35%
Gene Interaction Network
Click a node to explore
MRPL40MRPS6MRPS9MRPL36MRPS2MRPS5MRPS7
PROTEIN STRUCTURE
Preparing viewer…
PDB7OF0 · 2.20 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.14LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.73 [0.48–1.14]
RankingsWhere MRPL40 stands among ~20K protein-coding genes
  • #6,818of 20,598
    Most Researched69
  • #11,874of 17,882
    Most Constrained (LOEUF)1.14
Genes detectedMRPL40
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Haploinsufficiency of the 22q11.2 microdeletion gene Mrpl40 disrupts short-term synaptic plasticity and working memory through dysregulation of mitochondrial calcium.
PMID: 27184122
Mol Psychiatry · 2017
1.00
2
Mitochondrial proteins encoded by the 22q11.2 neurodevelopmental locus regulate neural stem and progenitor cell proliferation.
PMID: 37794116
Mol Psychiatry · 2023
0.90
3
Mitochondrial deficits in human iPSC-derived neurons from patients with 22q11.2 deletion syndrome and schizophrenia.
PMID: 31740674
Transl Psychiatry · 2019
0.80
4
Expression and prognosis analysis of mitochondrial ribosomal protein family in breast cancer.
PMID: 35739158
Sci Rep · 2022
0.70
5
Mitochondrial Proteostasis Requires Genes Encoded in a Neurodevelopmental Syndrome Locus.
PMID: 34261699
J Neurosci · 2021
0.60