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9 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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MRPS9
mitochondrial ribosomal protein S9
Chromosome 2 · 2q12.1
NCBI Gene: 64965Ensembl: ENSG00000135972.10HGNC: HGNC:14501UniProt: P82933
134PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingprotein bindingmitochondrionmitochondrial small ribosomal subunitneurodegenerative diseasekidney diseasejuvenile dermatomyositismajor depressive disorder
✦AI Summary

MRPS9 (mitochondrial ribosomal protein S9) is a structural component of the mitochondrial small ribosomal subunit essential for mitochondrial translation 1. As a nuclear-encoded protein, MRPS9 is critical for synthesizing the 13 oxidative phosphorylation subunits encoded by mitochondrial DNA 1. The protein functions within the 82-protein mitoribosomal complex composed of 12S rRNA, 16S rRNA, and associated proteins 2. Mechanistically, MRPS9 regulates neuronal survival through the PI3K/Akt/mTOR signaling pathway 3. MRPS9 overexpression activates this pathway, inhibiting neuronal apoptosis and promoting cell viability under ischemic stress conditions 3. The protein interacts with other mitoribosomal components; perturbation of related mitoribosomal proteins (like DAP3/MRPS29) reduces MRPS9 protein levels, indicating coordinated assembly of the small subunit 1. Clinically, MRPS9 dysregulation is implicated in ischemic stroke (IS) and end-stage renal disease (ESRD) comorbidity 4. Bioinformatic analyses identified MRPS9 as a hub gene in IS-related epigenetic networks 5, with significant downregulation observed in comorbid IS-ESRD patients 4. The protein also appears relevant to cancer prognosis, as MRPS9-AS1 (an antisense lncRNA) associates with prognostic signatures in renal cell carcinoma and colon cancer 6 7. These findings highlight MRPS9's dual role in mitochondrial bioenergetics and disease pathogenesis.

Sources cited
1
MRPS9 regulates PI3K/Akt/mTOR pathway to inhibit neuronal apoptosis in ischemic stroke
PMID: 38381220
2
MRPS9 identified as key mitochondrial ribosomal protein gene downregulated in IS-ESRD comorbidity
PMID: 40379713
3
MRPS9 identified as hub gene in epigenetic and miRNA regulatory networks in ischemic stroke
PMID: 37322932
4
MRPS9 is a component of the 82-protein mitoribosomal complex required for oxidative phosphorylation subunit synthesis
PMID: 39701103
5
MRPS9 protein levels are reduced when mitoribosomal assembly is disrupted by DAP3 variants
PMID: 39371131
6
MRPS9-AS1 lncRNA is prognostically significant in papillary renal cell carcinoma
PMID: 36674979
7
MRPS9-AS1 lncRNA identified as lipid metabolism-related biomarker in colon cancer prognosis
PMID: 36280825
8
MRPS9 forms protein-protein interactions with other cellular proteins relevant to tumorigenic processes
PMID: 34492114
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.37Weak
kidney diseaseOpen Targets
0.30Weak
juvenile dermatomyositisOpen Targets
0.27Weak
major depressive disorderOpen Targets
0.26Weak
eye diseaseOpen Targets
0.16Weak
liver diseaseOpen Targets
0.07Suggestive
duodenal disorderOpen Targets
0.06Suggestive
esophageal diseaseOpen Targets
0.06Suggestive
stomach diseaseOpen Targets
0.06Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
EpiphoraOpen Targets
0.03Suggestive
atopic eczemaOpen Targets
0.03Suggestive
obesityOpen Targets
0.03Suggestive
joint diseaseOpen Targets
0.03Suggestive
type 2 diabetes mellitusOpen Targets
0.02Suggestive
hydronephrosisOpen Targets
0.02Suggestive
polyarteritis nodosaOpen Targets
0.02Suggestive
tooth diseaseOpen Targets
0.02Suggestive
placenta praeviaOpen Targets
0.02Suggestive
cardiac transplantOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MRPL55Shared pathway100%MRPL52Shared pathway100%MRPL34Protein interaction100%MRPL43Protein interaction100%MRPL10Protein interaction100%ABCF1Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Liver
40%
Ovary
38%
Brain
34%
Bone Marrow
31%
Lung
26%
Gene Interaction Network
Click a node to explore
MRPS9MRPL55MRPL52MRPL34MRPL43MRPL10ABCF1
PROTEIN STRUCTURE
Preparing viewer…
PDB7QI4 · 2.21 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.26LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.92 [0.69–1.26]
RankingsWhere MRPS9 stands among ~20K protein-coding genes
  • #3,461of 20,598
    Most Researched134 · top quartile
  • #13,279of 17,882
    Most Constrained (LOEUF)1.26
Genes detectedMRPS9
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
Insight into the mechanism of DNA methylation and miRNA-mRNA regulatory network in ischemic stroke.
PMID: 37322932
Math Biosci Eng · 2023
1.00
2
Bioinformatics analysis of comorbid mechanisms between ischemic stroke and end stage renal disease.
PMID: 40379713
Sci Rep · 2025
0.89
3
MRPS9-Mediated Regulation of the PI3K/Akt/mTOR Pathway Inhibits Neuron Apoptosis and Protects Ischemic Stroke.
PMID: 38381220
J Mol Neurosci · 2024
0.78
4
Cuproptosis-Related LncRNA-Based Prediction of the Prognosis and Immunotherapy Response in Papillary Renal Cell Carcinoma.
PMID: 36674979
Int J Mol Sci · 2023
0.67
5
Bi-allelic variants in DAP3 result in reduced assembly of the mitoribosomal small subunit with altered apoptosis and a Perrault-syndrome-spectrum phenotype.
PMID: 39701103
Am J Hum Genet · 2025
0.56