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GeneE
3 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
MRPL54
mitochondrial ribosomal protein L54
Chromosome 19 Β· 19p13.3
NCBI Gene: 116541Ensembl: ENSG00000183617.6HGNC: HGNC:16685UniProt: Q6P161
48PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
mitochondrial large ribosomal subunitprotein bindingRNA bindingmitochondrionhemangioma of subcutaneous tissuehepatocellular carcinomaadenomaneoplasm
✦AI Summary

MRPL54 is a mitochondrial ribosomal protein component of the large ribosomal subunit that functions in mitochondrial translation. As a structural constituent of the mitochondrial ribosome with RNA-binding capacity, MRPL54 participates in the translation of electron transport chain complex subunits critical for ATP production 1. In cancer biology, MRPL54 has emerged as a dysregulated RNA-binding protein across multiple malignancies. It was identified as one of four hub genes in a prognostic model for hepatocellular carcinoma (HCC), where altered MRPL54 expression correlates with tumor progression and patient survival outcomes, contributing to a predictive signature with strong discriminatory ability (ROC-AUC 0.814) 2. Similarly, MRPL54 was ranked among the top RNA-binding proteins associated with breast cancer in machine-learning predictions of cancer-related proteins 3. Despite its association with cancer progression, functional studies demonstrate nuanced roles: reduced MRPL54 expression did not impair adenoma formation, intestinal proliferation, or metabolic parameters in a genetic mouse model of colorectal cancer 1. This suggests MRPL54's dysregulation may serve as a biomarker for cancer rather than a direct driver of tumorigenesis, highlighting its potential clinical utility in cancer prognosis and treatment stratification rather than as a therapeutic target.

Sources cited
1
MRPL54 is dysregulated in hepatocellular carcinoma and serves as a hub gene in a prognostic model predicting patient survival with strong predictive ability
PMID: 33910445
2
MRPL54 is a mitochondrial ribosomal protein involved in translation of electron transport chain complex subunits; reduced expression does not alter adenoma formation or metabolic parameters in colorectal cancer models
PMID: 41801951
3
MRPL54 was identified as a top-ranked RNA-binding protein associated with breast cancer using machine-learning prediction of cancer-related proteins
PMID: 32444848
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
hemangioma of subcutaneous tissueOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
adenomaOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
asthmaOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.01Suggestive
Alzheimer diseaseOpen Targets
0.01Suggestive
breast cancerOpen Targets
0.00Suggestive
chronic kidney diseaseOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
leukemiaOpen Targets
0.00Suggestive
lung adenocarcinomaOpen Targets
0.00Suggestive
psoriasisOpen Targets
0.00Suggestive
pancreatic ductal adenocarcinomaOpen Targets
0.00Suggestive
colorectal cancerOpen Targets
0.00Suggestive
relapsing-remitting multiple sclerosisOpen Targets
0.00Suggestive
BK-virus nephropathyOpen Targets
0.00Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.00Suggestive
hypertrophic cardiomyopathyOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
GATBShared pathway100%MRPS31Shared pathway100%MRPL48Shared pathway100%MRPL39Shared pathway100%MRPL50Shared pathway100%PTCD3Shared pathway100%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
79%
Heart
58%
Brain
53%
Lung
44%
Ovary
42%
Gene Interaction Network
Click a node to explore
MRPL54GATBMRPS31MRPL48MRPL39MRPL50PTCD3
PROTEIN STRUCTURE
Preparing viewer…
PDB7QI4 Β· 2.21 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.18LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.73 [0.46–1.18]
RankingsWhere MRPL54 stands among ~20K protein-coding genes
  • #9,101of 20,598
    Most Researched48
  • #12,303of 17,882
    Most Constrained (LOEUF)1.18
Genes detectedMRPL54
Sources retrieved3 papers
Response timeβ€”
πŸ“„ Sources
3
1
Development and Validation of a RNA Binding Protein-Associated Prognostic Model for Hepatocellular Carcinoma.
PMID: 33910445
Technol Cancer Res Treat Β· 2021
1.00
2
Reduced levels of mitochondrial ribosomal protein MRPL54 does not alter Apc related adenoma formation.
PMID: 41801951
PLoS One Β· 2026
0.67
3
Prediction of breast cancer proteins involved in immunotherapy, metastasis, and RNA-binding using molecular descriptors and artificial neural networks.
PMID: 32444848
Sci Rep Β· 2020
0.33